RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 DCAF16Q9NXF7 216 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 LPAR3Q9UBY5 353 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 CLN8Q9UBY8 286 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 OR5V1Q9UGF6 321 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 A3GALT2U3KPV4 340 aa12.48□□□□□ -0.41
ACTB-213ENST00000493945 ITPR2Q14571 2701 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 A0A1W2PPH5 198 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 MCRIP1C9JLW8 97 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 RGS5O15539 181 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 PDCD6O75340 191 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 FOXH1O75593 365 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 ECDO95905 644 aaPredicted RBP12.47□□□□□ -0.41
ACTB-213ENST00000493945 OR2H2O95918 312 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 FUT3P21217 361 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 SCN1BQ07699 218 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 PIGYQ3MUY2 71 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 CD276Q5ZPR3 534 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 ZNF788Q6ZQV5 615 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 GDPD3Q7L5L3 318 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 RNF144BQ7Z419 303 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 SAMD12Q8N8I0 201 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 TMEM104Q8NE00 496 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 OR5T2Q8NGG2 359 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 MCFD2Q8NI22 146 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 C15orf40Q8WUR7 153 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 S100A16Q96FQ6 103 aaKnown RBP12.47□□□□□ -0.41
ACTB-213ENST00000493945 C1orf147Q96MC9 270 aaPredicted RBP12.47□□□□□ -0.41
ACTB-213ENST00000493945 NUDT16L1Q9BRJ7 211 aaKnown RBP12.47□□□□□ -0.41
ACTB-213ENST00000493945 C6orf62Q9GZU0 229 aaPredicted RBP12.47□□□□□ -0.41
ACTB-213ENST00000493945 ATG5Q9H1Y0 275 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 RAB9BQ9NP90 201 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 COMMD3Q9UBI1 195 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 RABL2AQ9UBK7 228 aaPredicted RBP12.47□□□□□ -0.41
ACTB-213ENST00000493945 SLC25A10Q9UBX3 287 aaPredicted RBP12.47□□□□□ -0.41
ACTB-213ENST00000493945 RABL2BQ9UNT1 228 aa12.47□□□□□ -0.41
ACTB-213ENST00000493945 PRRC2AP48634 2157 aaKnown RBP12.46□□□□□ -0.41
ACTB-213ENST00000493945 NOTCH2Q04721 2471 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 DOCK11Q5JSL3 2073 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 A0A075B6Q4 140 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 IGKV1D-17A0A075B6S4 117 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 A6NHS1 94 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 SIRPB1O00241 398 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 GEMIN2O14893 280 aaKnown RBP12.46□□□□□ -0.41
ACTB-213ENST00000493945 CA11O75493 328 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 IGHV2-5P01817 119 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 APOA1P02647 267 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 COL10A1Q03692 680 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 LOXL1Q08397 574 aaPredicted RBP12.46□□□□□ -0.41
ACTB-213ENST00000493945 UNC119Q13432 240 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 TAF9Q16594 264 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 OR8H2Q8N162 312 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 C19orf18Q8NEA5 215 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 CLDND2Q8NHS1 167 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 CCL13Q99616 98 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 SSBP3Q9BWW4 388 aaPredicted RBP12.46□□□□□ -0.41
ACTB-213ENST00000493945 REG4Q9BYZ8 158 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 BARHL1Q9BZE3 327 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 MMP27Q9H306 513 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 PLEKHJ1Q9NW61 149 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 ZNF222Q9UK12 451 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 PEX16Q9Y5Y5 336 aa12.46□□□□□ -0.41
ACTB-213ENST00000493945 CCDC168Q8NDH2 2452 aa12.46□□□□□ -0.42
ACTB-213ENST00000493945 TRBV23-1A0A0A0MS06 115 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 FAM25AB3EWG3 89 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 FAM25CB3EWG5 89 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 FAM25GB3EWG6 89 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 F8VVB4 439 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 F8VWA3 439 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 MGST3O14880 152 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 LDLRAD4O15165 306 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 PAHP00439 452 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 CSN2P05814 226 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 NDUFB7P17568 137 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 LMO1P25800 156 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 BLVRBP30043 206 aaPredicted RBP12.45□□□□□ -0.42
ACTB-213ENST00000493945 QRFPP83859 136 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 GRK1Q15835 563 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 NKAPLQ5M9Q1 402 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 OR10K2Q6IF99 312 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 BAIAP2L2Q6UXY1 529 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 ST8SIA4Q92187 359 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 RAB3CQ96E17 227 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 GAFA1Q96PS6 74 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 LPAR5Q9H1C0 372 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 CREBBPQ92793 2442 aa12.45□□□□□ -0.42
ACTB-213ENST00000493945 A0A0B4J203 849 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 A0A1W2PP11 408 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 SERPINE3A8MV23 424 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 F5H0A9 414 aaPredicted RBP12.44□□□□□ -0.42
ACTB-213ENST00000493945 K7N7A8 449 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 TK1P04183 234 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 DUSP1P28562 367 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 MNDAP41218 407 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 VEGFCP49767 419 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 GZMKP49863 264 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 Q6ZTK2 550 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 CD177Q8N6Q3 437 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 FAM216BQ8N7L0 139 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 OR10R2Q8NGX6 335 aa12.44□□□□□ -0.42
ACTB-213ENST00000493945 DPCDQ9BVM2 203 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms