RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 PHYHD1Q5SRE7 291 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 C1orf140Q5VVS0 124 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 WBP2NLQ6ICG8 309 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 ACSM5Q6NUN0 579 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 AAED1Q7RTV5 226 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 NR2C2APQ86WQ0 139 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 CMTM4Q8IZR5 234 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 MUC20Q8N307 709 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-234ENST00000493923 PRR18Q8N4B5 295 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 IQCF1Q8N6M8 205 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 ZNF525Q8N782 197 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 ADPRHL1Q8NDY3 354 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 OR4K5Q8NGD3 323 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 LGALS14Q8TCE9 139 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 THRSPQ92748 146 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 BCL2L2Q92843 193 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-234ENST00000493923 TMEM45BQ96B21 275 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 KTI12Q96EK9 354 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-234ENST00000493923 MISP3Q96FF7 219 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 BSCL2Q96G97 398 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-234ENST00000493923 SMIM8Q96KF7 97 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 RHOVQ96L33 236 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 ALKBH3Q96Q83 286 aaPredicted RBP7.03□□□□□ -1.28
HDAC6-234ENST00000493923 SULT4A1Q9BR01 284 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 ZNF649Q9BS31 505 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 ADAT1Q9BUB4 502 aaKnown RBP7.03□□□□□ -1.28
HDAC6-234ENST00000493923 SLITRK2Q9H156 845 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 ATG5Q9H1Y0 275 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 AUNIPQ9H7T9 357 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 NRIP3Q9NQ35 241 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 PARP11Q9NR21 331 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 YAE1D1Q9NRH1 226 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 B3GAT1Q9P2W7 334 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 P2RX2Q9UBL9 471 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 CACFD1Q9UGQ2 172 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 MOKQ9UQ07 419 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 GAB2Q9UQC2 676 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 ATP23Q9Y6H3 246 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 V9GYS6 101 aa7.03□□□□□ -1.28
HDAC6-234ENST00000493923 NBEAL1Q6ZS30 2694 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 A0A096LPE4 126 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 IGHV1-18A0A0C4DH31 117 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 A0A1W2PPZ6 126 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 SMCO3A2RU48 225 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 CXorf65A6NEN9 183 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 A6NLC8 198 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 A8MVM7 634 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 J3QRE1 110 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 FFAR1O14842 300 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 SURF4O15260 269 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 DLEU1O43261 78 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 CD5LO43866 347 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 IGFBP1P08833 259 aaPredicted RBP7.02□□□□□ -1.29
HDAC6-234ENST00000493923 PNMTP11086 282 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 SNRPBP14678 240 aaKnown RBP7.02□□□□□ -1.29
HDAC6-234ENST00000493923 CD34P28906 385 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 OMPP47874 163 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 GSK3AP49840 483 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 ACTA2P62736 377 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 ACTG2P63267 376 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 MSMPQ1L6U9 139 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 ZNF311Q5JNZ3 666 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 PODNL1Q6PEZ8 512 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 ARL9Q6T311 187 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 TMEM108Q6UXF1 575 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 ZNF440Q8IYI8 595 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 MUC15Q8N387 334 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 GPR137CQ8N3F9 429 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 PRSS35Q8N3Z0 413 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 OR5AP2Q8NGF4 316 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 OR6T1Q8NGN1 323 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 OR4A4PQ8NGN8 299 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 OR1K1Q8NGR3 316 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 OR4K15Q8NH41 348 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 RNASEH2CQ8TDP1 164 aaKnown RBP7.02□□□□□ -1.29
HDAC6-234ENST00000493923 DTD1Q8TEA8 209 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 TAAR8Q969N4 342 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 HAVCR1Q96D42 359 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 GALNT14Q96FL9 552 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 KIRREL1Q96J84 757 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 MICU1Q9BPX6 476 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 NAA11Q9BSU3 229 aaPredicted RBP7.02□□□□□ -1.29
HDAC6-234ENST00000493923 CBLN4Q9NTU7 201 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 MTFP1Q9UDX5 166 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 FAM96BQ9Y3D0 163 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 FBXO7Q9Y3I1 522 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 ADAM18Q9Y3Q7 739 aa7.02□□□□□ -1.29
HDAC6-234ENST00000493923 TRBV6-7A0A0A0MS04 114 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 A0A1B0GWA3 101 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 A0A1W2PPE3 182 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 A0A1W2PPH5 198 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 C7orf77A4D0Y5 90 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 A8MWP6 167 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 HSPA12AO43301 675 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 FMO6PO60774 539 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 ZNF432O94892 652 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 GCGP01275 180 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 OR5AC1P0C628 307 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 PET100P0DJ07 73 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 RD3LP0DJH9 198 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms