RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 CECR9P0C854 216 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 ZNF141Q15928 474 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 UGT2A3Q6UWM9 527 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 PAGE2Q7Z2X7 111 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 LINC00596Q86U02 117 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 DOK4Q8TEW6 326 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 FXYD5Q96DB9 178 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 PYURFQ96I23 114 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 YPEL4Q96NS1 127 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 NXF2Q9GZY0 626 aaKnown RBP1.52□□□□□ -2.17
SMC4-223ENST00000493695 TXNIPQ9H3M7 391 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 DSN1Q9H410 356 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 SDHAF3Q9NRP4 125 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 NLE1Q9NVX2 485 aaPredicted RBP1.52□□□□□ -2.17
SMC4-223ENST00000493695 SDHAF2Q9NX18 166 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 BZW2Q9Y6E2 419 aaKnown RBP1.52□□□□□ -2.17
SMC4-223ENST00000493695 ZNF780BQ9Y6R6 833 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 ICOSQ9Y6W8 199 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 MIA3Q5JRA6 1907 aa1.52□□□□□ -2.17
SMC4-223ENST00000493695 ATRNO75882 1429 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 NRCAMQ92823 1304 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 A0A1B0GU33 70 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 ZNF729A6NN14 1252 aaPredicted RBP1.51□□□□□ -2.17
SMC4-223ENST00000493695 GGTLC3B5MD39 225 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 SC5DO75845 299 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 IGKV1D-33P01593 117 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 IGKV1-33P01594 117 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 IGHMP01871 453 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 TRGV3P03979 118 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 CDK1P06493 297 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 PTNP21246 168 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 TGFBR2P37173 567 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 CARD18P57730 90 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 WDR43Q15061 677 aaKnown RBP eCLIP1.51□□□□□ -2.17
SMC4-223ENST00000493695 PYDC2Q56P42 97 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 ZNF773Q6PK81 442 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 CYP4Z1Q86W10 505 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 CPNE9Q8IYJ1 553 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 SPICQ8N5J4 248 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 Q8NAQ8 132 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 IGF2BP2-AS1Q96M15 143 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 ZNF75AQ96N20 296 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 BIRC8Q96P09 236 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 VAT1Q99536 393 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 SAMHD1Q9Y3Z3 626 aaKnown RBP1.51□□□□□ -2.17
SMC4-223ENST00000493695 FADS3Q9Y5Q0 445 aa1.51□□□□□ -2.17
SMC4-223ENST00000493695 ZNF706Q9Y5V0 76 aaPredicted RBP1.51□□□□□ -2.17
SMC4-223ENST00000493695 F5H5P2 479 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 SLC31A1O15431 190 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 AQP9O43315 295 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 M6PRP20645 277 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 ELK4P28324 431 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 DNASE1L1P49184 302 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 C2orf80Q0P641 193 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 DHRS2Q13268 280 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 RESP18Q5W5W9 173 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 ATPAF2Q8N5M1 289 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 MUC7Q8TAX7 377 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 CDKL2Q92772 493 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 APOBEC3DQ96AK3 386 aaPredicted RBP1.5□□□□□ -2.17
SMC4-223ENST00000493695 POMKQ9H5K3 350 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 SLC22A14Q9Y267 594 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 DYSFO75923 2080 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 VWA8A3KMH1 1905 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 LTBP2Q14767 1821 aa1.5□□□□□ -2.17
SMC4-223ENST00000493695 LEUTXA8MZ59 168 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 K7ERS5 55 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 MYO1DO94832 1006 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 ZNF708P17019 499 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 LGALS7P47929 136 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 GCLMP48507 274 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 GZMMP51124 257 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 RAB38P57729 211 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 XIAPP98170 497 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 BAXQ07812 192 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 BNIP2Q12982 314 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 GPR176Q14439 515 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 CASP8Q14790 479 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 TNXAQ16473 311 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 TMEM241Q24JQ0 296 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 UBE2NLQ5JXB2 153 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 DPPA2Q7Z7J5 298 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 GALNT10Q86SR1 603 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 LYPD6Q86Y78 171 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 EIF4E3Q8N5X7 224 aaKnown RBP1.49□□□□□ -2.17
SMC4-223ENST00000493695 BPIFB6Q8NFQ5 453 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 BLNKQ8WV28 456 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 C22orf15Q8WYQ4 148 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 OTUB2Q96DC9 234 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 FMC1Q96HJ9 113 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 RHOFQ9HBH0 211 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 VCX3AQ9NNX9 186 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 DNAJC27Q9NZQ0 273 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 MCTS1Q9ULC4 181 aaKnown RBP1.49□□□□□ -2.17
SMC4-223ENST00000493695 ARAP3Q8WWN8 1544 aa1.49□□□□□ -2.17
SMC4-223ENST00000493695 IGKV1D-37A0A075B6S9 117 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 A0A1W2PNM2 257 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 PGPA6NDG6 321 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 RBFOX3A6NFN3 312 aa1.48□□□□□ -2.17
SMC4-223ENST00000493695 E7EQL1 145 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms