RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 WI2-2373I1.2A0A1W2PRP0 233 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 SH2D7A6NKC9 451 aaPredicted RBP13.85□□□□□ -0.19
COL9A1-210ENST00000493682 SULT1C4O75897 302 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 OR2F2O95006 317 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 IGLV1-47P01700 117 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 AMY1AP04745 511 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 AMY2AP04746 511 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 PRKACAP17612 351 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 CDK2P24941 298 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 POU3F4P49335 361 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 RBP2P50120 134 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 ATP1B3P54709 279 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 DEFB121Q5J5C9 76 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 SPIN3Q5JUX0 258 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 OR52W1Q6IF63 320 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 HEPN1Q6WQI6 88 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 RDH10Q8IZV5 341 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 OR10H4Q8NGA5 316 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 ZNF596Q8TC21 504 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 BCAS4Q8TDM0 211 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 PP6455Q8WZ26 134 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 RBM14Q96PK6 669 aaKnown RBP13.85□□□□□ -0.19
COL9A1-210ENST00000493682 GAL3ST2Q9H3Q3 398 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 GLS2Q9UI32 602 aa13.85□□□□□ -0.19
COL9A1-210ENST00000493682 TRGV10A0A0A0MS01 117 aa13.84□□□□□ -0.19
COL9A1-210ENST00000493682 LOC107986453A0A1B0GWG9 222 aa13.84□□□□□ -0.19
COL9A1-210ENST00000493682 FAM172BPA6NC97 362 aa13.84□□□□□ -0.19
COL9A1-210ENST00000493682 LEUTXA8MZ59 168 aa13.84□□□□□ -0.19
COL9A1-210ENST00000493682 SIRPB1O00241 398 aa13.84□□□□□ -0.19
COL9A1-210ENST00000493682 GYG2O15488 501 aa13.84□□□□□ -0.19
COL9A1-210ENST00000493682 DUS4LO95620 317 aaKnown RBP13.84□□□□□ -0.19
COL9A1-210ENST00000493682 CYB5AP00167 134 aa13.84□□□□□ -0.19
COL9A1-210ENST00000493682 HTR1FP30939 366 aa13.84□□□□□ -0.19
COL9A1-210ENST00000493682 MTCP1P56278 107 aa13.84□□□□□ -0.19
COL9A1-210ENST00000493682 CDC42P60953 191 aa13.84□□□□□ -0.19
COL9A1-210ENST00000493682 KHDC1LQ5JSQ8 128 aa13.84□□□□□ -0.19
COL9A1-210ENST00000493682 CORO2AQ92828 525 aa13.84□□□□□ -0.19
COL9A1-210ENST00000493682 ADAT3Q96EY9 351 aaPredicted RBP13.84□□□□□ -0.19
COL9A1-210ENST00000493682 HMG20AQ9NP66 347 aa13.84□□□□□ -0.19
COL9A1-210ENST00000493682 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.84□□□□□ -0.19
COL9A1-210ENST00000493682 HHLA2Q9UM44 414 aa13.84□□□□□ -0.19
COL9A1-210ENST00000493682 KMT2CQ8NEZ4 4911 aaKnown RBP13.83□□□□□ -0.2
COL9A1-210ENST00000493682 G3V2T6 193 aa13.83□□□□□ -0.2
COL9A1-210ENST00000493682 SH2D1BO14796 132 aa13.83□□□□□ -0.2
COL9A1-210ENST00000493682 UBCP0CG48 685 aaKnown RBP13.83□□□□□ -0.2
COL9A1-210ENST00000493682 CD34P28906 385 aa13.83□□□□□ -0.2
COL9A1-210ENST00000493682 GDNFP39905 211 aa13.83□□□□□ -0.2
COL9A1-210ENST00000493682 KIR3DL2P43630 455 aa13.83□□□□□ -0.2
COL9A1-210ENST00000493682 GLIPR1P48060 266 aa13.83□□□□□ -0.2
COL9A1-210ENST00000493682 ARHGDIBP52566 201 aa13.83□□□□□ -0.2
COL9A1-210ENST00000493682 PDZK1IP1Q13113 114 aa13.83□□□□□ -0.2
COL9A1-210ENST00000493682 DNAL1Q4LDG9 190 aa13.83□□□□□ -0.2
COL9A1-210ENST00000493682 KDM4DQ6B0I6 523 aa13.83□□□□□ -0.2
COL9A1-210ENST00000493682 ZNF286AQ9HBT8 521 aa13.83□□□□□ -0.2
COL9A1-210ENST00000493682 EXOSC4Q9NPD3 245 aaKnown RBP13.83□□□□□ -0.2
COL9A1-210ENST00000493682 TAS2R3Q9NYW6 316 aa13.83□□□□□ -0.2
COL9A1-210ENST00000493682 GSTK1Q9Y2Q3 226 aa13.83□□□□□ -0.2
COL9A1-210ENST00000493682 CLIC3O95833 236 aa13.82□□□□□ -0.2
COL9A1-210ENST00000493682 OR2H2O95918 312 aa13.82□□□□□ -0.2
COL9A1-210ENST00000493682 ATF1P18846 271 aa13.82□□□□□ -0.2
COL9A1-210ENST00000493682 PRKACBP22694 351 aa13.82□□□□□ -0.2
COL9A1-210ENST00000493682 HOXD3P31249 432 aaPredicted RBP13.82□□□□□ -0.2
COL9A1-210ENST00000493682 CEACAM3P40198 252 aa13.82□□□□□ -0.2
COL9A1-210ENST00000493682 ISL1P61371 349 aa13.82□□□□□ -0.2
COL9A1-210ENST00000493682 AESQ08117 197 aa13.82□□□□□ -0.2
COL9A1-210ENST00000493682 EGFEM1PQ0D2K5 195 aa13.82□□□□□ -0.2
COL9A1-210ENST00000493682 TPTE2P1Q5T6R2 138 aa13.82□□□□□ -0.2
COL9A1-210ENST00000493682 LINC00482Q8N8I6 264 aa13.82□□□□□ -0.2
COL9A1-210ENST00000493682 CREB3L1Q96BA8 519 aa13.82□□□□□ -0.2
COL9A1-210ENST00000493682 GNG8Q9UK08 70 aa13.82□□□□□ -0.2
COL9A1-210ENST00000493682 IGKV1-12A0A0C4DH73 117 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 FUOMA2VDF0 154 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 LY6LH3BQJ8 138 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 BUB1B-PAK6H3BSN5 160 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 TOR1AO14656 332 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 IGKV1D-12P01611 117 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 LMO1P25800 156 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 ATP6V1E1P36543 226 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 ZNF85Q03923 595 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 KPNB1Q14974 876 aaKnown RBP13.81□□□□□ -0.2
COL9A1-210ENST00000493682 ATP6AP1Q15904 470 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 HLA-DRB5Q30154 266 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 TP53I3Q53FA7 332 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 C9orf152Q5JTZ5 239 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 UTF1Q5T230 341 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 LHFPL2Q6ZUX7 228 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 UTS2BQ765I0 119 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 FAM220AQ7Z4H9 259 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 OSR2Q8N2R0 312 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 RFT1Q96AA3 541 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 FGGYQ96C11 551 aa13.81□□□□□ -0.2
COL9A1-210ENST00000493682 ODAMA1E959 279 aa13.8□□□□□ -0.2
COL9A1-210ENST00000493682 M0QZK8 103 aa13.8□□□□□ -0.2
COL9A1-210ENST00000493682 ZNF20P17024 532 aa13.8□□□□□ -0.2
COL9A1-210ENST00000493682 POLR2IP36954 125 aaKnown RBP13.8□□□□□ -0.2
COL9A1-210ENST00000493682 PTGFRP43088 359 aa13.8□□□□□ -0.2
COL9A1-210ENST00000493682 PRRX1P54821 245 aa13.8□□□□□ -0.2
COL9A1-210ENST00000493682 SCN1BQ07699 218 aa13.8□□□□□ -0.2
COL9A1-210ENST00000493682 TMEM244Q5VVB8 128 aa13.8□□□□□ -0.2
COL9A1-210ENST00000493682 CCDC144NLQ6NUI1 221 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms