RNA–Protein interactions for RNA: ENST00000493608.1

COL6A3-214, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-214ENST00000493608 SCN1BQ07699 218 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 RAB40BQ12829 278 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 GRK1Q15835 563 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 ZSCAN26Q16670 478 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 KLHL22Q53GT1 634 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 DHRS7BQ6IAN0 325 aaPredicted RBP8.66□□□□□ -1.02
COL6A3-214ENST00000493608 CRIP3Q6Q6R5 217 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 GDPGP1Q6ZNW5 385 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 LHFPL2Q6ZUX7 228 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 OR8H2Q8N162 312 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 SYS1Q8N2H4 156 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 ZSCAN4Q8NAM6 433 aaPredicted RBP8.66□□□□□ -1.02
COL6A3-214ENST00000493608 BEND2Q8NDZ0 799 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 OR4S1Q8NGB4 309 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 OR5AK2Q8NH90 309 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 CYGBQ8WWM9 190 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 NKX3-1Q99801 234 aaPredicted RBP8.66□□□□□ -1.02
COL6A3-214ENST00000493608 PPA2Q9H2U2 334 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 NEK6Q9HC98 313 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.66□□□□□ -1.02
COL6A3-214ENST00000493608 VPREB3Q9UKI3 123 aa8.66□□□□□ -1.02
COL6A3-214ENST00000493608 WNK1Q9H4A3 2382 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 TRBV2A0A0J9YWF9 115 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 hCG_1809904A0A1W2PP81 198 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 A0A1W2PPE2 198 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 A0A1W2PR64 198 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 A0A1W2PRV1 198 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 C17orf98A8MV24 154 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 ARG1P05089 322 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 HCKP08631 526 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 ZNF728P0DKX0 622 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 PEX2P28328 305 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 ADMP35318 185 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 SOX2P48431 317 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 RAB13P51153 203 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 MIDNQ504T8 468 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 PRR31Q5SQ13 230 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 OR2G6Q5TZ20 316 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 XAF1Q6GPH4 301 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 SLC35E4Q6ICL7 350 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 TCF23Q7RTU1 214 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 Q8IYB0 196 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 DYNAPQ8N1N2 210 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 OR5R1Q8NH85 324 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 TSEN15Q8WW01 171 aaKnown RBP8.65□□□□□ -1.02
COL6A3-214ENST00000493608 SPSB1Q96BD6 273 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 COMMD4Q9H0A8 199 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 MEGF9Q9H1U4 602 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 ZNF696Q9H7X3 374 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 HMG20AQ9NP66 347 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 INPP5EQ9NRR6 644 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 MRPS18AQ9NVS2 196 aaKnown RBP8.65□□□□□ -1.02
COL6A3-214ENST00000493608 ING3Q9NXR8 418 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 DHDHQ9UQ10 334 aa8.65□□□□□ -1.02
COL6A3-214ENST00000493608 CMYA5Q8N3K9 4069 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 TMEM212A6NML5 194 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 SH2D1BO14796 132 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 MMP23AO75900 390 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 OR2H2O95918 312 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 TMEM225BP0DP42 221 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 OR3A1P47881 315 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 RPL15P61313 204 aaKnown RBP8.64□□□□□ -1.03
COL6A3-214ENST00000493608 DYNC1I2Q13409 638 aaKnown RBP8.64□□□□□ -1.03
COL6A3-214ENST00000493608 IL18R1Q13478 541 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 ZNF146Q15072 292 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 RCN1Q15293 331 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 LRRC75BQ2VPJ9 315 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 LDLRAD2Q5SZI1 272 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 ZNF691Q5VV52 312 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 HIST2H2BDQ6DRA6 164 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 BAIAP2L2Q6UXY1 529 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 SATL1Q86VE3 508 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 SERPINA12Q8IW75 414 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 OR5D14Q8NGL3 314 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 OR13D1Q8NGV5 346 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 PPP1R35Q8TAP8 253 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 RGP1Q92546 391 aaPredicted RBP8.64□□□□□ -1.03
COL6A3-214ENST00000493608 ORAI1Q96D31 301 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 ZNF714Q96N38 554 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 NR1H4Q96RI1 486 aaPredicted RBP8.64□□□□□ -1.03
COL6A3-214ENST00000493608 MYCBPQ99417 103 aaPredicted RBP8.64□□□□□ -1.03
COL6A3-214ENST00000493608 FGF20Q9NP95 211 aaPredicted RBP8.64□□□□□ -1.03
COL6A3-214ENST00000493608 EXOSC4Q9NPD3 245 aaKnown RBP8.64□□□□□ -1.03
COL6A3-214ENST00000493608 CLEC2DQ9UHP7 191 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 GLS2Q9UI32 602 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 SIGLEC9Q9Y336 463 aa8.64□□□□□ -1.03
COL6A3-214ENST00000493608 SIRT4Q9Y6E7 314 aaPredicted RBP8.64□□□□□ -1.03
COL6A3-214ENST00000493608 hADV38S2A0JD32 116 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 SULT1B1O43704 296 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 KDM4BO94953 1096 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 MT-ND2P03891 347 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 RPSAP08865 295 aaKnown RBP8.63□□□□□ -1.03
COL6A3-214ENST00000493608 CCDC159P0C7I6 412 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 IGHV1-8P0DP01 117 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 ZNF44P15621 663 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 JUNBP17275 347 aaPredicted RBP8.63□□□□□ -1.03
COL6A3-214ENST00000493608 TGFBR2P37173 567 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 GLIPR1P48060 266 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 PROK1P58294 105 aa8.63□□□□□ -1.03
COL6A3-214ENST00000493608 AESQ08117 197 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms