RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 OR3A4PP47883 348 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 CYB561P49447 251 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 CCL11P51671 97 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 MTCP1P56278 107 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 TMEM50BP56557 158 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 B3GALT5-AS1P59052 145 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 OC90Q02509 493 aaPredicted RBP4.38□□□□□ -1.71
PTPRK-213ENST00000490332 PPP1R1AQ13522 171 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 RSU1Q15404 277 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 MICBQ29980 383 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 SLC22A6Q4U2R8 563 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 PAN3Q58A45 887 aaKnown RBP4.38□□□□□ -1.71
PTPRK-213ENST00000490332 PLAC9Q5JTB6 97 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 ACER2Q5QJU3 275 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 DCAF12L2Q5VW00 463 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 PLXDC2Q6UX71 529 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 MOB3CQ70IA8 216 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 KCTD9Q7L273 389 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 FAM214BQ7L5A3 538 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 OVCH2Q7RTZ1 564 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 PPP1R32Q7Z5V6 425 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 DPPA2Q7Z7J5 298 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 LHFPL1Q86WI0 220 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 WDFY1Q8IWB7 410 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 ZSCAN4Q8NAM6 433 aaPredicted RBP4.38□□□□□ -1.71
PTPRK-213ENST00000490332 PXT1Q8NFP0 134 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 MARCH1Q8TCQ1 289 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 PPP1R1CQ8WVI7 109 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 NUDCD2Q8WVJ2 157 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 ST8SIA2Q92186 375 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 ST8SIA4Q92187 359 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 CPNE4Q96A23 557 aaPredicted RBP4.38□□□□□ -1.71
PTPRK-213ENST00000490332 NABP1Q96AH0 204 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 TMEM45BQ96B21 275 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 CMBLQ96DG6 245 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 MBD6Q96DN6 1003 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 PIK3IP1Q96FE7 263 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 CCDC120Q96HB5 630 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 ARHGAP5-AS1Q96IT6 56 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 C2orf50Q96LR7 162 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 C1orf147Q96MC9 270 aaPredicted RBP4.38□□□□□ -1.71
PTPRK-213ENST00000490332 JSRP1Q96MG2 331 aaPredicted RBP4.38□□□□□ -1.71
PTPRK-213ENST00000490332 GNRHR2Q96P88 292 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 ARPC5LQ9BPX5 153 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 SYT3Q9BQG1 590 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 PECRQ9BY49 303 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 REG4Q9BYZ8 158 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 LINC00470Q9BZP3 86 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 PIGMQ9H3S5 423 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 KCNK15Q9H427 330 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 AKIRIN1Q9H9L7 192 aaPredicted RBP4.38□□□□□ -1.71
PTPRK-213ENST00000490332 RNF122Q9H9V4 155 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 BCO1Q9HAY6 547 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 CHMP1AQ9HD42 196 aaPredicted RBP4.38□□□□□ -1.71
PTPRK-213ENST00000490332 TMEM38BQ9NVV0 291 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 C19orf73Q9NVV2 129 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 PLEKHJ1Q9NW61 149 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 C1orf123Q9NWV4 160 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 RASL12Q9NYN1 266 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 IL36GQ9NZH8 169 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 ZNF319Q9P2F9 582 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 B4GALT7Q9UBV7 327 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 TCFL5Q9UL49 500 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 SPEF1Q9Y4P9 236 aa4.38□□□□□ -1.71
PTPRK-213ENST00000490332 PHF3Q92576 2039 aaKnown RBP4.38□□□□□ -1.71
PTPRK-213ENST00000490332 PRKDCP78527 4128 aaKnown RBP4.37□□□□□ -1.71
PTPRK-213ENST00000490332 ANK3Q12955 4377 aaKnown RBP4.37□□□□□ -1.71
PTPRK-213ENST00000490332 TRAV14DV4A0A0A6YYC5 116 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 IGKV1-9A0A0C4DH69 117 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 C13orf42A0A1B0GVH6 325 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 RNF222A6NCQ9 220 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 OR5H15A6NDH6 313 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 ZSCAN5BA6NJL1 495 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 OR2AT4A6NND4 320 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 FAM25EA8MYX2 175 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 C21orf140B9A014 251 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 EEF1E1-BLOC1S5C9J1V9 151 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 F5H0A9 414 aaPredicted RBP4.37□□□□□ -1.71
PTPRK-213ENST00000490332 F8VVB4 439 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 F8VWA3 439 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 TNFSF11O14788 317 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 CYTIPO60759 359 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 RAMP1O60894 148 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 SYNGR4O95473 234 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 CLDN14O95500 239 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 LCATP04180 440 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 COX5BP10606 129 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 SLC2A1P11166 492 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 LYL1P12980 280 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 CRYGSP22914 178 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 SERPINF1P36955 418 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 RBMXP38159 391 aaKnown RBP4.37□□□□□ -1.71
PTPRK-213ENST00000490332 RBP2P50120 134 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 SNU13P55769 128 aaKnown RBP4.37□□□□□ -1.71
PTPRK-213ENST00000490332 UCP3P55916 312 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 CLDN15P56746 228 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 FOXL2P58012 376 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 TAGLNQ01995 201 aaKnown RBP4.37□□□□□ -1.71
PTPRK-213ENST00000490332 Q0VFX4 171 aa4.37□□□□□ -1.71
PTPRK-213ENST00000490332 SNTB1Q13884 538 aaKnown RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms