RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 XKP51811 444 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 STX4Q12846 297 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 GPR176Q14439 515 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 GUSBP1Q15486 140 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 LGALSLQ3ZCW2 172 aaPredicted RBP1.77□□□□□ -2.13
CD46-216ENST00000490278 ACTL10Q5JWF8 245 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 Q6ZQT7 251 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 GALNT10Q86SR1 603 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 ZFP82Q8N141 532 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 C3orf22Q8N5N4 141 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 OR6K3Q8NGY3 331 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 BLNKQ8WV28 456 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 ZNF75AQ96N20 296 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 CIB1Q99828 191 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 COPS4Q9BT78 406 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 RHOFQ9HBH0 211 aa1.77□□□□□ -2.13
CD46-216ENST00000490278 CACNA1DQ01668 2161 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 NRCAMQ92823 1304 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 RBFOX3A6NFN3 312 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 GGTLC3B5MD39 225 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 F5H5P2 479 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 FFAR1O14842 300 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 SOD3P08294 240 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 CECR9P0C854 216 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 SCGB1C2P0DMR2 95 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 PRTN3P24158 256 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 NUP62P37198 522 aaPredicted RBP1.76□□□□□ -2.13
CD46-216ENST00000490278 RANBP1P43487 201 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 DNASE1L1P49184 302 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 TNFRSF9Q07011 255 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 ACTBL2Q562R1 376 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 TMEM215Q68D42 235 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 GLYATQ6IB77 296 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 FAM19A1Q7Z5A9 133 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 EIF4E3Q8N5X7 224 aaKnown RBP1.76□□□□□ -2.13
CD46-216ENST00000490278 DRAXINQ8NBI3 349 aaPredicted RBP1.76□□□□□ -2.13
CD46-216ENST00000490278 BPIFB6Q8NFQ5 453 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 CLHC1Q8NHS4 586 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 LGALS14Q8TCE9 139 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 SCGB1C1Q8TD33 95 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 ZCCHC13Q8WW36 166 aaKnown RBP1.76□□□□□ -2.13
CD46-216ENST00000490278 CCL17Q92583 94 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 FMC1Q96HJ9 113 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 GLT1D1Q96MS3 346 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 NAP1L5Q96NT1 182 aaPredicted RBP1.76□□□□□ -2.13
CD46-216ENST00000490278 ANAPC13Q9BS18 74 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 PLEKHA1Q9HB21 404 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 DIABLOQ9NR28 239 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 RBM12B-AS1Q9P1G2 102 aa1.76□□□□□ -2.13
CD46-216ENST00000490278 C14orf166Q9Y224 244 aaKnown RBP1.76□□□□□ -2.13
CD46-216ENST00000490278 ADAMTSL3P82987 1691 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 ZMPSTE24O75844 475 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 IGKV1D-33P01593 117 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 IGKV1-33P01594 117 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 HLA-AP01891 365 aaKnown RBP1.75□□□□□ -2.13
CD46-216ENST00000490278 ZNF708P17019 499 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 M6PRP20645 277 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 ELK4P28324 431 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 TGFBR2P37173 567 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 GZMMP51124 257 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 RAB38P57729 211 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 C2orf80Q0P641 193 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 ERICH5Q6P6B1 374 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 TPGS1Q6ZTW0 290 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 DPPA2Q7Z7J5 298 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 PDCL2Q8N4E4 241 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 MUC7Q8TAX7 377 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 TWIST2Q8WVJ9 160 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 NELFBQ8WX92 580 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 ZNF396Q96N95 335 aaPredicted RBP1.75□□□□□ -2.13
CD46-216ENST00000490278 ZNF436Q9C0F3 470 aaPredicted RBP1.75□□□□□ -2.13
CD46-216ENST00000490278 GABARAPL1Q9H0R8 117 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 RMND1Q9NWS8 449 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 PLXNB3Q9ULL4 1909 aa1.75□□□□□ -2.13
CD46-216ENST00000490278 ZNF407Q9C0G0 2248 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 IGLV10-54A0A075B6I4 117 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 A0A0B4J2C4 111 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 A0A1B0GXF2 115 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 MYBPHLA2RUH7 354 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 A8MWP4 228 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 E7EQL1 145 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 PSCAO43653 123 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 PSIP1O75475 530 aaKnown RBP1.74□□□□□ -2.13
CD46-216ENST00000490278 MYO1DO94832 1006 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 GIMD1P0DJR0 217 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 GTF2F2P13984 249 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 CCNOP22674 350 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 CNTFRP26992 372 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 GCLMP48507 274 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 TTPAP49638 278 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 ZNF83P51522 516 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 XIAPP98170 497 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 TNXAQ16473 311 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 KRTAP6-3Q3LI67 103 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 OR8G5Q8NG78 346 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 OR2M3Q8NG83 312 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 BIRC8Q96P09 236 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 HINT2Q9BX68 163 aa1.74□□□□□ -2.13
CD46-216ENST00000490278 SLC25A31Q9H0C2 315 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms