RNA–Protein interactions for RNA: ENST00000490207.5

SMC4-222, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-222ENST00000490207 AJUBAQ96IF1 538 aa16.07■□□□□ 0.16
SMC4-222ENST00000490207 RHOFQ9HBH0 211 aa16.07■□□□□ 0.16
SMC4-222ENST00000490207 LINC00312Q9Y6C7 94 aa16.07■□□□□ 0.16
SMC4-222ENST00000490207 SH2D1BO14796 132 aa16.06■□□□□ 0.16
SMC4-222ENST00000490207 MGST3O14880 152 aa16.06■□□□□ 0.16
SMC4-222ENST00000490207 OR2H2O95918 312 aa16.06■□□□□ 0.16
SMC4-222ENST00000490207 RAB3AP20336 220 aa16.06■□□□□ 0.16
SMC4-222ENST00000490207 MED21Q13503 144 aa16.06■□□□□ 0.16
SMC4-222ENST00000490207 LRRC75BQ2VPJ9 315 aa16.06■□□□□ 0.16
SMC4-222ENST00000490207 OGFRL1Q5TC84 451 aaPredicted RBP16.06■□□□□ 0.16
SMC4-222ENST00000490207 OR13D1Q8NGV5 346 aa16.06■□□□□ 0.16
SMC4-222ENST00000490207 GPR148Q8TDV2 347 aa16.06■□□□□ 0.16
SMC4-222ENST00000490207 CPNE2Q96FN4 548 aaPredicted RBP16.06■□□□□ 0.16
SMC4-222ENST00000490207 SSX3Q99909 188 aa16.06■□□□□ 0.16
SMC4-222ENST00000490207 HSPE1-MOB4S4R3N1 261 aa16.06■□□□□ 0.16
SMC4-222ENST00000490207 ANKRD65E5RJM6 399 aa16.05■□□□□ 0.16
SMC4-222ENST00000490207 CASQ2O14958 399 aaPredicted RBP16.05■□□□□ 0.16
SMC4-222ENST00000490207 CD2P06729 351 aa16.05■□□□□ 0.16
SMC4-222ENST00000490207 IGHV1-8P0DP01 117 aa16.05■□□□□ 0.16
SMC4-222ENST00000490207 TMEM225BP0DP42 221 aa16.05■□□□□ 0.16
SMC4-222ENST00000490207 PAX6P26367 422 aa16.05■□□□□ 0.16
SMC4-222ENST00000490207 CAPGP40121 348 aa16.05■□□□□ 0.16
SMC4-222ENST00000490207 Q6ZSV7 163 aa16.05■□□□□ 0.16
SMC4-222ENST00000490207 TMEM80Q96HE8 168 aa16.05■□□□□ 0.16
SMC4-222ENST00000490207 MEGF9Q9H1U4 602 aa16.05■□□□□ 0.16
SMC4-222ENST00000490207 ZNF696Q9H7X3 374 aa16.05■□□□□ 0.16
SMC4-222ENST00000490207 TAS2R4Q9NYW5 299 aa16.05■□□□□ 0.16
SMC4-222ENST00000490207 RNF114Q9Y508 228 aa16.05■□□□□ 0.16
SMC4-222ENST00000490207 MAGEB3O15480 346 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 CLPXO76031 633 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 ARG1P05089 322 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 ZNF44P15621 663 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 ERP29P30040 261 aaKnown RBP16.04■□□□□ 0.16
SMC4-222ENST00000490207 TGFBR2P37173 567 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 P2RX3P56373 397 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 PRR31Q5SQ13 230 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 ZNF529Q6P280 563 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 TRAPPC6BQ86SZ2 158 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 C8orf59Q8N0T1 100 aaPredicted RBP16.04■□□□□ 0.16
SMC4-222ENST00000490207 OR51A2Q8NGJ7 313 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 OR52N1Q8NH53 320 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 LINC01006Q8NI28 216 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 SMIM19Q96E16 107 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 GPER1Q99527 375 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 PPA2Q9H2U2 334 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 CHCHD3Q9NX63 227 aaKnown RBP16.04■□□□□ 0.16
SMC4-222ENST00000490207 CLEC2DQ9UHP7 191 aa16.04■□□□□ 0.16
SMC4-222ENST00000490207 ODF3BA8MYP8 253 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 GABRPO00591 440 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 LALBAP00709 142 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 GNAO1P09471 354 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 MTNR1BP49286 362 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 SCN1BQ07699 218 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 LY6EQ16553 131 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 AANATQ16613 207 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 ZNF626Q68DY1 528 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 ASPHD2Q6ICH7 369 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 BRICD5Q6PL45 260 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 LHFPL4Q7Z7J7 247 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 SATL1Q86VE3 508 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 GGHQ92820 318 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 TMEM106AQ96A25 262 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 FOXRED1Q96CU9 486 aaPredicted RBP16.03■□□□□ 0.16
SMC4-222ENST00000490207 FAM192AQ9GZU8 254 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 VCXQ9H320 206 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 BABAM2Q9NXR7 383 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 UBE2J1Q9Y385 318 aaPredicted RBP16.03■□□□□ 0.16
SMC4-222ENST00000490207 TBL2Q9Y4P3 447 aaKnown RBP16.03■□□□□ 0.16
SMC4-222ENST00000490207 SIRT4Q9Y6E7 314 aaPredicted RBP16.03■□□□□ 0.16
SMC4-222ENST00000490207 SESN1Q9Y6P5 492 aa16.03■□□□□ 0.16
SMC4-222ENST00000490207 FUOMA2VDF0 154 aa16.02■□□□□ 0.16
SMC4-222ENST00000490207 OGG1O15527 345 aa16.02■□□□□ 0.16
SMC4-222ENST00000490207 LMO1P25800 156 aa16.02■□□□□ 0.16
SMC4-222ENST00000490207 PPP3R1P63098 170 aa16.02■□□□□ 0.16
SMC4-222ENST00000490207 SRSF4Q08170 494 aaKnown RBP16.02■□□□□ 0.16
SMC4-222ENST00000490207 ST3GAL4Q11206 333 aa16.02■□□□□ 0.16
SMC4-222ENST00000490207 Q6P435 159 aa16.02■□□□□ 0.16
SMC4-222ENST00000490207 CHST4Q8NCG5 386 aa16.02■□□□□ 0.16
SMC4-222ENST00000490207 PXT1Q8NFP0 134 aa16.02■□□□□ 0.16
SMC4-222ENST00000490207 OR11H6Q8NGC7 330 aa16.02■□□□□ 0.16
SMC4-222ENST00000490207 TNFAIP8L1Q8WVP5 186 aa16.02■□□□□ 0.16
SMC4-222ENST00000490207 C16orf95Q9H693 158 aa16.02■□□□□ 0.16
SMC4-222ENST00000490207 ZNF281Q9Y2X9 895 aa16.02■□□□□ 0.16
SMC4-222ENST00000490207 TRRAPQ9Y4A5 3859 aa16.01■□□□□ 0.15
SMC4-222ENST00000490207 EFCAB10A6NFE3 127 aa16.01■□□□□ 0.15
SMC4-222ENST00000490207 FAM90A8PA6NJQ4 464 aa16.01■□□□□ 0.15
SMC4-222ENST00000490207 SLC33A1O00400 549 aaPredicted RBP16.01■□□□□ 0.15
SMC4-222ENST00000490207 TSPAN9O75954 239 aa16.01■□□□□ 0.15
SMC4-222ENST00000490207 DYNC1I2Q13409 638 aaKnown RBP16.01■□□□□ 0.15
SMC4-222ENST00000490207 PLA1AQ53H76 456 aa16.01■□□□□ 0.15
SMC4-222ENST00000490207 OR13C5Q8NGS8 318 aa16.01■□□□□ 0.15
SMC4-222ENST00000490207 CITED1Q99966 193 aa16.01■□□□□ 0.15
SMC4-222ENST00000490207 CNOT2Q9NZN8 540 aaKnown RBP16.01■□□□□ 0.15
SMC4-222ENST00000490207 TRGV10A0A0A0MS01 117 aa16■□□□□ 0.15
SMC4-222ENST00000490207 A0A0G2JK05 382 aa16■□□□□ 0.15
SMC4-222ENST00000490207 XPNPEP2O43895 674 aa16■□□□□ 0.15
SMC4-222ENST00000490207 CSN2P05814 226 aa16■□□□□ 0.15
SMC4-222ENST00000490207 PROK1P58294 105 aa16■□□□□ 0.15
SMC4-222ENST00000490207 AESQ08117 197 aa16■□□□□ 0.15
SMC4-222ENST00000490207 ATXN7L3Q14CW9 347 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms