RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 Q8IYB0 196 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 ENTHD1Q8IYW4 607 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 ELMOD2Q8IZ81 293 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 Q8NFD4 153 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 BBS1Q8NFJ9 593 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 RAX2Q96IS3 184 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 PRR25Q96S07 402 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 CDRT15Q96T59 188 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 FEVQ99581 238 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 CADM1Q9BY67 442 aaKnown RBP6.46□□□□□ -1.38
USP39-216ENST00000490193 PCDHB16Q9NRJ7 776 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 TAS2R3Q9NYW6 316 aa6.46□□□□□ -1.38
USP39-216ENST00000490193 HYDINQ4G0P3 5121 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 IGKV1-27A0A075B6S5 117 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 TRBV2A0A0J9YWF9 115 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 CCDC182A6NF36 153 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 NUDT19A8MXV4 375 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 CCL24O00175 119 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 IGHG2P01859 326 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 FAM106CPP0CH98 169 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 GABRR1P24046 479 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 CDK2P24941 298 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 OR3A1P47881 315 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 LUMP51884 338 aaPredicted RBP6.45□□□□□ -1.38
USP39-216ENST00000490193 CDC42P60953 191 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 RPS7P62081 194 aaKnown RBP6.45□□□□□ -1.38
USP39-216ENST00000490193 ESRRGP62508 458 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 SLC35B1P78383 322 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 APOFQ13790 326 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 SPIN3Q5JUX0 258 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 LCE1DQ5T752 114 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 BCL2L15Q5TBC7 163 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 PRAMEF5Q5TYX0 476 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 CYP2R1Q6VVX0 501 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 TRAPPC6BQ86SZ2 158 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 C5orf56Q8N8D9 126 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 OR5M8Q8NGP6 311 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 TRMT10AQ8TBZ6 339 aaKnown RBP6.45□□□□□ -1.38
USP39-216ENST00000490193 GIPC3Q8TF64 312 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 EMG1Q92979 244 aaKnown RBP6.45□□□□□ -1.38
USP39-216ENST00000490193 SLAMF9Q96A28 289 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 NOL4LQ96MY1 436 aaPredicted RBP6.45□□□□□ -1.38
USP39-216ENST00000490193 CHST6Q9GZX3 395 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 ZNF286AQ9HBT8 521 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 IL36RNQ9UBH0 155 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 OR52A1Q9UKL2 312 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 COPS3Q9UNS2 423 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 SLC7A11Q9UPY5 501 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 R4GMQ9 66 aa6.45□□□□□ -1.38
USP39-216ENST00000490193 TRGV10A0A0A0MS01 117 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 FAM230AA0A1W2PPH8 454 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 FUOMA2VDF0 154 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 TOR1AO14656 332 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 ENTPD6O75354 484 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 GATBO75879 557 aaKnown RBP6.44□□□□□ -1.38
USP39-216ENST00000490193 CSN2P05814 226 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 SNRNP70P08621 437 aaKnown RBP6.44□□□□□ -1.38
USP39-216ENST00000490193 OSMP13725 252 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 GDNFP39905 211 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 FUT6P51993 359 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 PRRX1P54821 245 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 ACTR3P61158 418 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 KIR2DS1Q14954 304 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 UBE2V2Q15819 145 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 SLC25A26Q70HW3 274 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 STPG2Q8N412 459 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 RNF152Q8N8N0 203 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 CCDC54Q8NEL0 328 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 OR8U1Q8NH10 309 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 RCHY1Q96PM5 261 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 MNTQ99583 582 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 ASCL2Q99929 193 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 CHST5Q9GZS9 411 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 SLC25A19Q9HC21 320 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 ARGLU1Q9NWB6 273 aaPredicted RBP6.44□□□□□ -1.38
USP39-216ENST00000490193 NDE1Q9NXR1 346 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 GAR1Q9NY12 217 aaKnown RBP6.44□□□□□ -1.38
USP39-216ENST00000490193 GLS2Q9UI32 602 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 SCOCQ9UIL1 159 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 IKZF2Q9UKS7 526 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 ZNF256Q9Y2P7 627 aaPredicted RBP6.44□□□□□ -1.38
USP39-216ENST00000490193 SNX5Q9Y5X3 404 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 STARD9Q9P2P6 4700 aa6.44□□□□□ -1.38
USP39-216ENST00000490193 A0A1W2PPI3 338 aa6.43□□□□□ -1.38
USP39-216ENST00000490193 A6NIN4 97 aa6.43□□□□□ -1.38
USP39-216ENST00000490193 SERPINE3A8MV23 424 aa6.43□□□□□ -1.38
USP39-216ENST00000490193 PAX4O43316 350 aa6.43□□□□□ -1.38
USP39-216ENST00000490193 MRPL3P09001 348 aaKnown RBP6.43□□□□□ -1.38
USP39-216ENST00000490193 LYL1P12980 280 aa6.43□□□□□ -1.38
USP39-216ENST00000490193 ECI1P42126 302 aa6.43□□□□□ -1.38
USP39-216ENST00000490193 PTGFRP43088 359 aa6.43□□□□□ -1.38
USP39-216ENST00000490193 CDX1P47902 265 aaPredicted RBP6.43□□□□□ -1.38
USP39-216ENST00000490193 NPBWR2P48146 333 aa6.43□□□□□ -1.38
USP39-216ENST00000490193 CXCR4P61073 352 aa6.43□□□□□ -1.38
USP39-216ENST00000490193 FHL3Q13643 280 aa6.43□□□□□ -1.38
USP39-216ENST00000490193 FAM98BQ52LJ0 330 aaKnown RBP6.43□□□□□ -1.38
USP39-216ENST00000490193 TEX38Q6PEX7 206 aa6.43□□□□□ -1.38
USP39-216ENST00000490193 ZNF322Q6U7Q0 402 aaPredicted RBP6.43□□□□□ -1.38
USP39-216ENST00000490193 C16orf89Q6UX73 402 aa6.43□□□□□ -1.38
USP39-216ENST00000490193 SLC35E3Q7Z769 313 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms