RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 YLPM1P49750 1951 aaKnown RBP13.23□□□□□ -0.29
HDAC7-224ENST00000488927 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.23□□□□□ -0.296e-8■■■□□ 19.2
HDAC7-224ENST00000488927 DEGS1O15121 323 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 ZNF737O75373 536 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 OR2H2O95918 312 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 TFF1P04155 84 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 SELLP14151 372 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 ZNF44P15621 663 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 HNF1AP20823 631 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 GABRR1P24046 479 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 DUSP1P28562 367 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 PAX2Q02962 417 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 MPV17LQ2QL34 196 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 FAHD2BQ6P2I3 314 aaPredicted RBP13.23□□□□□ -0.29
HDAC7-224ENST00000488927 OR8H2Q8N162 312 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 KCNG3Q8TAE7 436 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 C8orf46Q8TAG6 207 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 DACT3Q96B18 629 aaPredicted RBP13.23□□□□□ -0.29
HDAC7-224ENST00000488927 FAHD2AQ96GK7 314 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 C1orf147Q96MC9 270 aaPredicted RBP13.23□□□□□ -0.29
HDAC7-224ENST00000488927 GFI1Q99684 422 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 DCTN5Q9BTE1 182 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 MRI1Q9BV20 369 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 IFT22Q9H7X7 185 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 LPAR3Q9UBY5 353 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 RPUSD1Q9UJJ7 312 aaKnown RBP13.23□□□□□ -0.29
HDAC7-224ENST00000488927 INSIG2Q9Y5U4 225 aa13.23□□□□□ -0.29
HDAC7-224ENST00000488927 A0A1W2PPH5 198 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 SHISA3A0PJX4 238 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FUOMA2VDF0 154 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FAM90A10PA6NDY2 464 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FAM90A18PA6NE21 464 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FAM90A16PA6NEW6 464 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FAM90A20PA6NIJ5 464 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FAM90A8PA6NJQ4 464 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FAM90A7PA6NKC0 464 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 IFITM5A6NNB3 132 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FAM90A22PA8MWA6 464 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FAM90A12PA8MX19 464 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FAM90A5PA8MXJ8 464 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FAM90A23PA8MXZ1 464 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 C22orf46C9J442 243 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 SIRPB1O00241 398 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 CRTAPO75718 401 aaPredicted RBP13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FAM90A15PP0C7V4 464 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FAM90A13PP0C7W8 464 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FAM90A14PP0C7W9 464 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FAM90A24PP0C7X0 464 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 ARSBP15848 533 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 MGMTP16455 207 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 SCN1BQ07699 218 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 CR1LQ2VPA4 569 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 Q6P435 159 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 GDPD3Q7L5L3 318 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 OR2W3Q7Z3T1 314 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 GPR141Q7Z602 305 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 H1FXQ92522 213 aaKnown RBP13.22□□□□□ -0.29
HDAC7-224ENST00000488927 CENPOQ9BU64 300 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 FUNDC2Q9BWH2 189 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 SPACA1Q9HBV2 294 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 MMP26Q9NRE1 261 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 STEAP1Q9UHE8 339 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 SCOCQ9UIL1 159 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 METRNQ9UJH8 293 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 MALRD1Q5VYJ5 2156 aa13.22□□□□□ -0.29
HDAC7-224ENST00000488927 TMEM82A0PJX8 343 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 NOTOA8MTQ0 251 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 AIPO00170 330 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 MGST3O14880 152 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 TMEM127O75204 238 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 FCN3O75636 299 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 OR7C1O76099 320 aaPredicted RBP13.21□□□□□ -0.29
HDAC7-224ENST00000488927 TFAP2AP05549 437 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 CSN2P05814 226 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 PPIAL4GP0DN37 164 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 ALDH3B2P48448 385 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 KCNJ3P48549 501 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 PAX8Q06710 450 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 GRK1Q15835 563 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 PIGYQ3MUY2 71 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 C17orf107Q6ZR85 190 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 Q71RC1 249 aaPredicted RBP13.21□□□□□ -0.29
HDAC7-224ENST00000488927 LY6G5BQ8NDX9 201 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 SLC25A28Q96A46 364 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 SELENOIQ9C0D9 397 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 SHARPINQ9H0F6 387 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 C7orf69Q9H7B7 122 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 CDC42EP3Q9UKI2 254 aa13.21□□□□□ -0.29
HDAC7-224ENST00000488927 HIVEP2P31629 2446 aa13.21□□□□□ -0.3
HDAC7-224ENST00000488927 ABCA2Q9BZC7 2435 aa13.21□□□□□ -0.3
HDAC7-224ENST00000488927 A0A0G2JK05 382 aa13.2□□□□□ -0.3
HDAC7-224ENST00000488927 A0A1W2PQ09 198 aa13.2□□□□□ -0.3
HDAC7-224ENST00000488927 SLC33A1O00400 549 aaPredicted RBP13.2□□□□□ -0.3
HDAC7-224ENST00000488927 GEMIN2O14893 280 aaKnown RBP13.2□□□□□ -0.3
HDAC7-224ENST00000488927 PSPNO60542 156 aa13.2□□□□□ -0.3
HDAC7-224ENST00000488927 VSIG8P0DPA2 414 aa13.2□□□□□ -0.3
HDAC7-224ENST00000488927 ERP29P30040 261 aaKnown RBP13.2□□□□□ -0.3
HDAC7-224ENST00000488927 SDC2P34741 201 aa13.2□□□□□ -0.3
HDAC7-224ENST00000488927 RPL5P46777 297 aaKnown RBP13.2□□□□□ -0.3
HDAC7-224ENST00000488927 OR10A3P58181 314 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms