RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 PPA2Q9H2U2 334 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 BANF2Q9H503 90 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 PLGRKTQ9HBL7 147 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 C19orf12Q9NSK7 152 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 RPUSD1Q9UJJ7 312 aaKnown RBP9.14□□□□□ -0.95
UBE4B-210ENST00000488228 SSR3Q9UNL2 185 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 INSIG2Q9Y5U4 225 aa9.14□□□□□ -0.95
UBE4B-210ENST00000488228 TRAV1-2A0A0B4J238 106 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 PPIAL4CA0A0B4J2A2 164 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 SLC22A1O15245 554 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 PSPNO60542 156 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 CRTAPO75718 401 aaPredicted RBP9.13□□□□□ -0.95
UBE4B-210ENST00000488228 CSTBP04080 98 aaKnown RBP9.13□□□□□ -0.95
UBE4B-210ENST00000488228 TK1P04183 234 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 CHRM2P08172 466 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 MGMTP16455 207 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 GALP22466 123 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 HTR2CP28335 458 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 FGF9P31371 208 aaPredicted RBP9.13□□□□□ -0.95
UBE4B-210ENST00000488228 TGFBR1P36897 503 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 OR3A1P47881 315 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 BMXP51813 675 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 CAV3P56539 151 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 CLDN12P56749 244 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 RAB11BQ15907 218 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 C1orf100Q5SVJ3 147 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 HES5Q5TA89 166 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 Q6P435 159 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 BTNL3Q6UXE8 466 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 C17orf107Q6ZR85 190 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 C1orf229Q6ZS94 237 aaPredicted RBP9.13□□□□□ -0.95
UBE4B-210ENST00000488228 NR2C2APQ86WQ0 139 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 FAM185AQ8N0U4 392 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 OSR2Q8N2R0 312 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 OR4S1Q8NGB4 309 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 OR4M1Q8NGD0 313 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 OR51T1Q8NGJ9 327 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 OR13F1Q8NGS4 319 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 RAB40AQ8WXH6 277 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 CYYR1Q96J86 154 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 DCTN5Q9BTE1 182 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 RHOFQ9HBH0 211 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 OPN4Q9UHM6 478 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 ST3GAL6Q9Y274 331 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 JMJD1CQ15652 2540 aa9.13□□□□□ -0.95
UBE4B-210ENST00000488228 A0A0B4J203 849 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 TRAV24A0A0B4J272 114 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 A0A0G2JK05 382 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 A0A1W2PQ09 198 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 K7N7A8 449 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 SLC33A1O00400 549 aaPredicted RBP9.12□□□□□ -0.95
UBE4B-210ENST00000488228 SLC17A2O00624 439 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 SH2D1BO14796 132 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 GEMIN2O14893 280 aaKnown RBP9.12□□□□□ -0.95
UBE4B-210ENST00000488228 AIREO43918 545 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 ECDO95905 644 aaPredicted RBP9.12□□□□□ -0.95
UBE4B-210ENST00000488228 CLEC2LP0C7M8 214 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 VSIG8P0DPA2 414 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 GTF2F2P13984 249 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 EDDM3BP56851 147 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 LSM3P62310 102 aaKnown RBP9.12□□□□□ -0.95
UBE4B-210ENST00000488228 MXD1Q05195 221 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 UNC119Q13432 240 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 IL13RA2Q14627 380 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 ATXN7L3Q14CW9 347 aaPredicted RBP9.12□□□□□ -0.95
UBE4B-210ENST00000488228 GRK1Q15835 563 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 TAF9Q16594 264 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 PAN3Q58A45 887 aaKnown RBP9.12□□□□□ -0.95
UBE4B-210ENST00000488228 NHLRC3Q5JS37 347 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 CD276Q5ZPR3 534 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 OR8H2Q8N162 312 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 TPRX1Q8N7U7 411 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 Q8NFD4 153 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 SLC25A28Q96A46 364 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 FOXRED1Q96CU9 486 aaPredicted RBP9.12□□□□□ -0.95
UBE4B-210ENST00000488228 KCTD7Q96MP8 289 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 MRI1Q9BV20 369 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 SELENOIQ9C0D9 397 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 SHARPINQ9H0F6 387 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 FAM234AQ9H0X4 552 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 C7orf69Q9H7B7 122 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 ING3Q9NXR8 418 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 ONECUT1Q9UBC0 465 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 GLS2Q9UI32 602 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 V9GY05 133 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 ZFHX3Q15911 3703 aa9.12□□□□□ -0.95
UBE4B-210ENST00000488228 IGHV3OR16-10A0A075B7F0 116 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 TRBV23-1A0A0A0MS06 115 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 KIR2DS1A0A191URI9 304 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 J3QLI3 93 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 PDCD5O14737 125 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 DEGS1O15121 323 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 ZNF780AO75290 641 aaPredicted RBP9.11□□□□□ -0.95
UBE4B-210ENST00000488228 OR7C1O76099 320 aaPredicted RBP9.11□□□□□ -0.95
UBE4B-210ENST00000488228 BPNT1O95861 308 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 MPIG6BO95866 241 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 UBBP0CG47 229 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 CD37P11049 281 aa9.11□□□□□ -0.95
UBE4B-210ENST00000488228 SLC2A2P11168 524 aaPredicted RBP9.11□□□□□ -0.95
UBE4B-210ENST00000488228 RAB3BP20337 219 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms