RNA–Protein interactions for RNA: ENST00000487880.2

USP48-209, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 524 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-209ENST00000487880 A0A0G2JMP0 313 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 A0A0X1KG70 313 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 NCF1BA6NI72 391 aaPredicted RBP2.34□□□□□ -2.03
USP48-209ENST00000487880 NCF1CA8MVU1 366 aaPredicted RBP2.34□□□□□ -2.03
USP48-209ENST00000487880 DFFAO00273 331 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 CYTH3O43739 400 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 RPSAP08865 295 aaKnown RBP2.34□□□□□ -2.03
USP48-209ENST00000487880 OR5AC1P0C628 307 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 NQO1P15559 274 aaKnown RBP2.34□□□□□ -2.03
USP48-209ENST00000487880 CFHR2P36980 270 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 MTPNP58546 118 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 KRTAP12-3P60328 96 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 RPL26P61254 145 aaKnown RBP2.34□□□□□ -2.03
USP48-209ENST00000487880 ADIGQ0VDE8 80 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 IHHQ14623 411 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 CCDC153Q494R4 210 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 TTMPQ5BVD1 217 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 HCP5Q6MZN7 132 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 C3orf62Q6ZUJ4 267 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 FA2HQ7L5A8 372 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 OR2W3Q7Z3T1 314 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 IFT20Q8IY31 132 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 ZFP62Q8NB50 900 aaPredicted RBP2.34□□□□□ -2.03
USP48-209ENST00000487880 CYB561A3Q8NBI2 242 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 LINC00301Q8NCQ3 95 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 ZNF707Q96C28 371 aaPredicted RBP2.34□□□□□ -2.03
USP48-209ENST00000487880 LRRC45Q96CN5 670 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 Q96MT0 163 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 CATSPER2Q96P56 530 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 OLFM3Q96PB7 478 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 CGREF1Q99674 301 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 GABRG3Q99928 467 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 IL22Q9GZX6 179 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 NSRP1Q9H0G5 558 aaKnown RBP2.34□□□□□ -2.03
USP48-209ENST00000487880 TMBIM4Q9HC24 238 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 FAM60AQ9NP50 221 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 STX18Q9P2W9 335 aaKnown RBP2.34□□□□□ -2.03
USP48-209ENST00000487880 PSME2Q9UL46 239 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 SLC22A7Q9Y694 548 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 ADAMTS12P58397 1594 aa2.34□□□□□ -2.03
USP48-209ENST00000487880 CEP170BQ9Y4F5 1589 aaPredicted RBP2.34□□□□□ -2.03
USP48-209ENST00000487880 PREX2Q70Z35 1606 aa2.34□□□□□ -2.04
USP48-209ENST00000487880 TMEM94Q12767 1356 aa2.34□□□□□ -2.04
USP48-209ENST00000487880 RIMS2Q9UQ26 1411 aa2.34□□□□□ -2.04
USP48-209ENST00000487880 N4BP2Q86UW6 1770 aaPredicted RBP2.33□□□□□ -2.04
USP48-209ENST00000487880 ABCC1P33527 1531 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 VWDEQ8N2E2 1590 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 TRAV8-4A0A0B4J246 113 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 SMIM31A0A1B0GVY4 71 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 P01737 135 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 RALBP11234 206 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 S100A1P23297 94 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 HSPA9P38646 679 aaKnown RBP2.33□□□□□ -2.04
USP48-209ENST00000487880 RGS6P49758 472 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 ATP5G2Q06055 141 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 C2orf54Q08AI8 447 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 SPCS2Q15005 226 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 BCL2A1Q16548 175 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 DEFB134Q4QY38 66 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 MLIPQ5VWP3 458 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 WDR59Q6PJI9 974 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 OR4C13Q8NGP0 309 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 FAM57AQ8TBR7 257 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 YIPF5Q969M3 257 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 CHMP6Q96FZ7 201 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 BLZF1Q9H2G9 400 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 RDH14Q9HBH5 336 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 ZMAT5Q9UDW3 170 aaKnown RBP2.33□□□□□ -2.04
USP48-209ENST00000487880 FADS3Q9Y5Q0 445 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 BZW2Q9Y6E2 419 aaKnown RBP2.33□□□□□ -2.04
USP48-209ENST00000487880 ENPP4Q9Y6X5 453 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 TET3O43151 1660 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 IFT172Q9UG01 1749 aa2.33□□□□□ -2.04
USP48-209ENST00000487880 ABCA8O94911 1581 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 DEPDC5O75140 1603 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 PREX1Q8TCU6 1659 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 J3QT63 122 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 PFDN1O60925 122 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 KCNK2O95069 426 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 PTTG1O95997 202 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 NRASP01111 189 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 HRASP01112 189 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 KRASP01116 189 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 IGHG2P01859 326 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 PAX6P26367 422 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 CSKP41240 450 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 HCCSP53701 268 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 ARPC4P59998 168 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 BIKQ13323 160 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 STK38Q15208 465 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 NDUFA5Q16718 116 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 MRPL2Q5T653 305 aaKnown RBP2.32□□□□□ -2.04
USP48-209ENST00000487880 RESP18Q5W5W9 173 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 THOC7Q6I9Y2 204 aaKnown RBP2.32□□□□□ -2.04
USP48-209ENST00000487880 C8orf74Q6P047 294 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 SLC35D2Q76EJ3 337 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 DNAJC9Q8WXX5 260 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 TLCD1Q96CP7 247 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 YIPF6Q96EC8 236 aa2.32□□□□□ -2.04
USP48-209ENST00000487880 DERL3Q96Q80 235 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms