RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 METTL11BQ5VVY1 283 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 PRAMEF6Q5VXH4 476 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 Q6P435 159 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 WDR82Q6UXN9 313 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 OVCH2Q7RTZ1 564 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 OR5AP2Q8NGF4 316 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 OR5H2Q8NGV7 314 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 RNASE6Q93091 150 aaKnown RBP7.99□□□□□ -1.13
SF3B1-211ENST00000487698 MRPL24Q96A35 216 aaKnown RBP7.99□□□□□ -1.13
SF3B1-211ENST00000487698 SYT3Q9BQG1 590 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 BEX2Q9BXY8 128 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 ALX4Q9H161 411 aaPredicted RBP7.99□□□□□ -1.13
SF3B1-211ENST00000487698 ZNF442Q9H7R0 627 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 BEX1Q9HBH7 125 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 SPACA1Q9HBV2 294 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 MYOZ1Q9NP98 299 aaPredicted RBP7.99□□□□□ -1.13
SF3B1-211ENST00000487698 CA10Q9NS85 328 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 CACNA1DQ01668 2161 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 TRAV24A0A0B4J272 114 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 TMEM82A0PJX8 343 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 FAM90A27PA6NNH2 459 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 GLAP06280 429 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 DUSP1P28562 367 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 MRPS15P82914 257 aaKnown RBP7.99□□□□□ -1.13
SF3B1-211ENST00000487698 CBX3Q13185 183 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 ZNF146Q15072 292 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 CDSNQ15517 529 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 MPPED2Q15777 294 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 SCGB2B2Q4G0G5 96 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 SPIN3Q5JUX0 258 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 CD276Q5ZPR3 534 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 VHLLQ6RSH7 139 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 ZNF826PQ6ZT77 177 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 LHFPL1Q86WI0 220 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 OR2Z1Q8NG97 314 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 SEC22CQ9BRL7 303 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 FN3KRPQ9HA64 309 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 COQ3Q9NZJ6 369 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 ANXA10Q9UJ72 324 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 VSIG4Q9Y279 399 aa7.99□□□□□ -1.13
SF3B1-211ENST00000487698 FAM221AA4D161 298 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 NKX2-6A6NCS4 301 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 A8MV72 311 aaPredicted RBP7.98□□□□□ -1.13
SF3B1-211ENST00000487698 SNRPGP15A8MWD9 76 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 NXPH2O95156 264 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 RLN1P04808 185 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 IFNA6P05013 189 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 SORDQ00796 357 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 CDK10Q15131 360 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 FCN2Q15485 313 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 CHRFAM7AQ494W8 412 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 NCMAPQ5T1S8 102 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 ZNF626Q68DY1 528 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 Q6ZS49 121 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 ZDHHC22Q8N966 263 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 SUMF2Q8NBJ7 301 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 ELMOD3Q96FG2 381 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 MED28Q9H204 178 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 NGBQ9NPG2 151 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 ETAA1Q9NY74 926 aa7.98□□□□□ -1.13
SF3B1-211ENST00000487698 PLSCR5A0PG75 271 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 SULT1A3P0DMM9 295 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 SULT1A4P0DMN0 295 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 GRNP28799 593 aaKnown RBP7.97□□□□□ -1.13
SF3B1-211ENST00000487698 OR3A3P47888 321 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 ADIPOQQ15848 244 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 SRSF7Q16629 238 aaKnown RBP eCLIP7.97□□□□□ -1.13
SF3B1-211ENST00000487698 ZNF660Q6AZW8 331 aaPredicted RBP7.97□□□□□ -1.13
SF3B1-211ENST00000487698 SLC22A25Q6T423 547 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 DMRTC2Q8IXT2 367 aaPredicted RBP7.97□□□□□ -1.13
SF3B1-211ENST00000487698 OR11H7Q8NGC8 314 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 TERB2Q8NHR7 220 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 DPCDQ9BVM2 203 aaPredicted RBP7.97□□□□□ -1.13
SF3B1-211ENST00000487698 PPA2Q9H2U2 334 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 RANGRFQ9HD47 186 aaPredicted RBP7.97□□□□□ -1.13
SF3B1-211ENST00000487698 EHFQ9NZC4 300 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 TAAR3PQ9P1P4 343 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 PKDREJQ9NTG1 2253 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 SPTBN1Q01082 2364 aaKnown RBP7.97□□□□□ -1.13
SF3B1-211ENST00000487698 SMG1Q96Q15 3661 aaKnown RBP7.97□□□□□ -1.13
SF3B1-211ENST00000487698 TRBV6-6A0A0A6YYG2 114 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 A6NLC8 198 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 SHISA9B4DS77 424 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 MCRIP1C9JLW8 97 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 SDCBPO00560 298 aaPredicted RBP7.97□□□□□ -1.13
SF3B1-211ENST00000487698 OR2H2O95918 312 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 CFHR2P36980 270 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 GATA4P43694 442 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 SELENOVP59797 346 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 ARPC4P59998 168 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 CD83Q01151 205 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 GRK1Q15835 563 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 SPRNQ5BIV9 151 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 AADACL3Q5VUY0 350 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 SHEQ5VZ18 495 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 ADAM5Q6NVV9 412 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 ACP7Q6ZNF0 438 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 PEG10Q86TG7 708 aaKnown RBP7.97□□□□□ -1.13
SF3B1-211ENST00000487698 TCTE3Q8IZS6 198 aa7.97□□□□□ -1.13
SF3B1-211ENST00000487698 OR10Z1Q8NGY1 313 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms