RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 COL10A1Q03692 680 aa11.06□□□□□ -0.64
COL4A6-207ENST00000487645 MXD1Q05195 221 aa11.06□□□□□ -0.64
COL4A6-207ENST00000487645 P2RY14Q15391 338 aa11.06□□□□□ -0.64
COL4A6-207ENST00000487645 MPV17LQ2QL34 196 aa11.06□□□□□ -0.64
COL4A6-207ENST00000487645 HES5Q5TA89 166 aa11.06□□□□□ -0.64
COL4A6-207ENST00000487645 FAM216BQ8N7L0 139 aa11.06□□□□□ -0.64
COL4A6-207ENST00000487645 ZNRF1Q8ND25 227 aa11.06□□□□□ -0.64
COL4A6-207ENST00000487645 TMEM104Q8NE00 496 aa11.06□□□□□ -0.64
COL4A6-207ENST00000487645 OR5D13Q8NGL4 314 aa11.06□□□□□ -0.64
COL4A6-207ENST00000487645 FAM3DQ96BQ1 224 aa11.06□□□□□ -0.64
COL4A6-207ENST00000487645 MSI2Q96DH6 328 aaKnown RBP11.06□□□□□ -0.64
COL4A6-207ENST00000487645 NAA50Q9GZZ1 169 aaKnown RBP11.06□□□□□ -0.64
COL4A6-207ENST00000487645 SLC25A10Q9UBX3 287 aaPredicted RBP11.06□□□□□ -0.64
COL4A6-207ENST00000487645 KIAA2026Q5HYC2 2103 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 LOC105371242A0A075B767 164 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 TRAV20A0A0B4J274 112 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 A0A1W2PP11 408 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 KIAA1324LA8MWY0 1029 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-207ENST00000487645 PHF1O43189 567 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-207ENST00000487645 ZNF737O75373 536 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 FCN3O75636 299 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 OR2H2O95918 312 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 TGFAP01135 160 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 TFF1P04155 84 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 TK1P04183 234 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 CLEC2LP0C7M8 214 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 MGMTP16455 207 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 ZFP36P26651 326 aaKnown RBP11.05□□□□□ -0.64
COL4A6-207ENST00000487645 TGFBR1P36897 503 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 CEBPDP49716 269 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-207ENST00000487645 DVL1P1P54792 670 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-207ENST00000487645 SNU13P55769 128 aaKnown RBP11.05□□□□□ -0.64
COL4A6-207ENST00000487645 NCS1P62166 190 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 LCN2P80188 198 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 SCN1BQ07699 218 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 IKZF1Q13422 519 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 PIGYQ3MUY2 71 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 SFXN4Q6P4A7 337 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 CSPG4Q6UVK1 2322 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 BIVMQ86UB2 503 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 CLVS1Q8IUQ0 354 aaPredicted RBP11.05□□□□□ -0.64
COL4A6-207ENST00000487645 OR51D1Q8NGF3 324 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 PPP1R35Q8TAP8 253 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 RAB2BQ8WUD1 216 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 PTX4Q96A99 478 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 DMRTB1Q96MA1 342 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 MRI1Q9BV20 369 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 SELENOIQ9C0D9 397 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 BANF2Q9H503 90 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 METRNQ9UJH8 293 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 RAB22AQ9UL26 194 aa11.05□□□□□ -0.64
COL4A6-207ENST00000487645 A0A1B0GW55 424 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 GEMIN2O14893 280 aaKnown RBP11.04□□□□□ -0.64
COL4A6-207ENST00000487645 LDLRAD4O15165 306 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 CD5LO43866 347 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 MPIG6BO95866 241 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 LIPFP07098 398 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 DUX4L2P0CJ85 424 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 DUX4L3P0CJ86 424 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 DUX4L4P0CJ87 422 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 DUX4L5P0CJ88 424 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 DUX4L6P0CJ89 424 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 DUX4L7P0CJ90 424 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 SELLP14151 372 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 ZNF44P15621 663 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 GATA3P23771 443 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 CLDN12P56749 244 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 SCAND1P57086 179 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 RPS27AP62979 156 aaKnown RBP11.04□□□□□ -0.64
COL4A6-207ENST00000487645 UNC119Q13432 240 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 FAM189A2Q15884 450 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 DUX4L9Q6RFH8 374 aaPredicted RBP11.04□□□□□ -0.64
COL4A6-207ENST00000487645 C17orf107Q6ZR85 190 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 USP43Q70EL4 1123 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 OR8H2Q8N162 312 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 ASCC1Q8N9N2 400 aaKnown RBP11.04□□□□□ -0.64
COL4A6-207ENST00000487645 TMEM185AQ8NFB2 350 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 ST8SIA4Q92187 359 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 Q96M66 194 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 URM1Q9BTM9 101 aaKnown RBP11.04□□□□□ -0.64
COL4A6-207ENST00000487645 TM2D1Q9BX74 207 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 TMEM59Q9BXS4 323 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 SHARPINQ9H0F6 387 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 LIN7BQ9HAP6 207 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 SPACA1Q9HBV2 294 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 DUX4Q9UBX2 424 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 OR5V1Q9UGF6 321 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 DAPK2Q9UIK4 370 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 F8P00451 2351 aa11.04□□□□□ -0.64
COL4A6-207ENST00000487645 KIR2DS1A0A191URI9 304 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 TMEM82A0PJX8 343 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 SMIM30A4D0T7 59 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 SLC33A1O00400 549 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-207ENST00000487645 MGST3O14880 152 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 PSPNO60542 156 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 OR7C1O76099 320 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-207ENST00000487645 CSN2P05814 226 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 GLAP06280 429 aa11.03□□□□□ -0.64
COL4A6-207ENST00000487645 SLC2A2P11168 524 aaPredicted RBP11.03□□□□□ -0.64
COL4A6-207ENST00000487645 NDUFB7P17568 137 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms