RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 POLR2J3Q9H1A7 115 aaKnown RBP4.36□□□□□ -1.71
COL4A3-206ENST00000487633 PPIL3Q9H2H8 161 aaKnown RBP4.36□□□□□ -1.71
COL4A3-206ENST00000487633 OR52D1Q9H346 318 aa4.36□□□□□ -1.71
COL4A3-206ENST00000487633 GHITMQ9H3K2 345 aa4.36□□□□□ -1.71
COL4A3-206ENST00000487633 INTS9Q9NV88 658 aaKnown RBP4.36□□□□□ -1.71
COL4A3-206ENST00000487633 ZNF446Q9NWS9 450 aa4.36□□□□□ -1.71
COL4A3-206ENST00000487633 DNAJB9Q9UBS3 223 aa4.36□□□□□ -1.71
COL4A3-206ENST00000487633 ZNF107Q9UII5 783 aaPredicted RBP4.36□□□□□ -1.71
COL4A3-206ENST00000487633 PSG11Q9UQ72 335 aa4.36□□□□□ -1.71
COL4A3-206ENST00000487633 KLHDC2Q9Y2U9 406 aa4.36□□□□□ -1.71
COL4A3-206ENST00000487633 SRRM2Q9UQ35 2752 aaKnown RBP4.36□□□□□ -1.71
COL4A3-206ENST00000487633 NACAE9PAV3 2078 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 IGHV7-81A0A0B4J1V7 117 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 TRAV39A0A0B4J263 110 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 IGHV1-3A0A0C4DH29 117 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 PQLC2LA1A4F0 135 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 UNC119BA6NIH7 251 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 TRPC5OSA6NMA1 111 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 PRR32B1ATL7 298 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 J3QT63 122 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 TOR1AO14656 332 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 DIRAS1O95057 198 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 CNIH1O95406 144 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 SERPINA1P01009 418 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 TRBV12-3P01733 135 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 INAFM2P0DMQ5 153 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 CGB3P0DN86 165 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 CGB7P0DN87 165 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 CTRB1P17538 263 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 PPIBP23284 216 aaKnown RBP4.35□□□□□ -1.71
COL4A3-206ENST00000487633 NFYBP25208 207 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 OPRL1P41146 370 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 NPBWR2P48146 333 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 RPS6KA3P51812 740 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 P2RX3P56373 397 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 LTC4SQ16873 150 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 LRRC23Q53EV4 343 aaPredicted RBP4.35□□□□□ -1.71
COL4A3-206ENST00000487633 AGKQ53H12 422 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 PLCXD3Q63HM9 321 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 CTRB2Q6GPI1 263 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 DNM1P34Q6PK57 102 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 ZBTB49Q6ZSB9 765 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 ASRGL1Q7L266 308 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 TMEM179BQ7Z7N9 219 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 MOB3BQ86TA1 216 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 RNF148Q8N7C7 305 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 ZNF454Q8N9F8 522 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 OR5A2Q8NGI9 324 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 RGP1Q92546 391 aaPredicted RBP4.35□□□□□ -1.71
COL4A3-206ENST00000487633 SLAMF9Q96A28 289 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 KIRREL1Q96J84 757 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 MS4A10Q96PG2 267 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 ABHD6Q9BV23 337 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 FNDC11Q9BVV2 318 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 SCRT1Q9BWW7 348 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 OR10A2Q9H208 303 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 MED4Q9NPJ6 270 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 SLC7A11Q9UPY5 501 aa4.35□□□□□ -1.71
COL4A3-206ENST00000487633 RNF213Q63HN8 5207 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 C16orf90A8MZG2 172 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 OOSP1A8MZH6 123 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 OR11H12B2RN74 326 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 SIRPB1O00241 398 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 DYNC1I1O14576 645 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 ATP8B1O43520 1251 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 HAND1O96004 215 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 HSPB1P04792 205 aaKnown RBP4.34□□□□□ -1.71
COL4A3-206ENST00000487633 EGR2P11161 476 aaPredicted RBP4.34□□□□□ -1.71
COL4A3-206ENST00000487633 GABRR1P24046 479 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 MPZP25189 248 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 HSD11B1P28845 292 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 BLVRBP30043 206 aaPredicted RBP4.34□□□□□ -1.71
COL4A3-206ENST00000487633 SOX6P35712 828 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 CEACAM3P40198 252 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 VHLP40337 213 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 MRPL19P49406 292 aaKnown RBP4.34□□□□□ -1.71
COL4A3-206ENST00000487633 HCCSP53701 268 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 SYNJ2BPP57105 145 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 ZNF91Q05481 1191 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 MFGE8Q08431 387 aaPredicted RBP4.34□□□□□ -1.71
COL4A3-206ENST00000487633 KLF5Q13887 457 aaPredicted RBP4.34□□□□□ -1.71
COL4A3-206ENST00000487633 ECSCRQ19T08 205 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 DEFB135Q30KP9 77 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 CD300EQ496F6 205 aaPredicted RBP4.34□□□□□ -1.71
COL4A3-206ENST00000487633 CCDC144NLQ6NUI1 221 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 EPGNQ6UW88 154 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 TRPM8Q7Z2W7 1104 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 GTSCR1Q86UQ5 136 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 RNF113BQ8IZP6 322 aaKnown RBP4.34□□□□□ -1.71
COL4A3-206ENST00000487633 MINDY2Q8NBR6 621 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 SLC37A3Q8NCC5 494 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 PROKR2Q8NFJ6 384 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 OR52L1Q8NGH7 329 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 OR8D4Q8NGM9 314 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 OR9G1Q8NH87 305 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 FANK1Q8TC84 345 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 RNF133Q8WVZ7 376 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 CORO2AQ92828 525 aa4.34□□□□□ -1.71
COL4A3-206ENST00000487633 RNF166Q96A37 237 aaPredicted RBP4.34□□□□□ -1.71
COL4A3-206ENST00000487633 RNF183Q96D59 192 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms