RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 TMEM133Q9H2Q1 129 aa10.05□□□□□ -0.8
SREBF1-215ENST00000487401 ZNF702PQ9H963 129 aa10.05□□□□□ -0.8
SREBF1-215ENST00000487401 HMG20AQ9NP66 347 aa10.05□□□□□ -0.8
SREBF1-215ENST00000487401 EXOSC4Q9NPD3 245 aaKnown RBP10.05□□□□□ -0.8
SREBF1-215ENST00000487401 NKX1-2Q9UD57 310 aaPredicted RBP10.05□□□□□ -0.8
SREBF1-215ENST00000487401 EXOGQ9Y2C4 368 aaKnown RBP10.05□□□□□ -0.8
SREBF1-215ENST00000487401 UBE2J1Q9Y385 318 aaPredicted RBP10.05□□□□□ -0.8
SREBF1-215ENST00000487401 DOCK11Q5JSL3 2073 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 TRGV10A0A0A0MS01 117 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 IGHV2-26A0A0B4J1V2 119 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 FBXO24O75426 580 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 MT-ND2P03891 347 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 RPSAP08865 295 aaKnown RBP10.04□□□□□ -0.8
SREBF1-215ENST00000487401 ERP29P30040 261 aaKnown RBP10.04□□□□□ -0.8
SREBF1-215ENST00000487401 OR3A1P47881 315 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 DYNLT3P51808 116 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 SCN1BQ07699 218 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 ALKBH1Q13686 389 aaKnown RBP10.04□□□□□ -0.8
SREBF1-215ENST00000487401 KPNB1Q14974 876 aaKnown RBP10.04□□□□□ -0.8
SREBF1-215ENST00000487401 LDLRAD2Q5SZI1 272 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 HIST2H2BDQ6DRA6 164 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 OR52W1Q6IF63 320 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 TCF23Q7RTU1 214 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 CBR4Q8N4T8 237 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 OR13C9Q8NGT0 318 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 LGALS12Q96DT0 336 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 PELI1Q96FA3 418 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 Q96MT0 163 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 CLEC7AQ9BXN2 247 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 GAL3ST2Q9H3Q3 398 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 ZCCHC4Q9H5U6 513 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 DCLRE1BQ9H816 532 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 LRRC42Q9Y546 428 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 GMPPBQ9Y5P6 360 aa10.04□□□□□ -0.8
SREBF1-215ENST00000487401 OR4C45A6NMZ5 311 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 KDM4BO94953 1096 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 FADS2O95864 444 aaKnown RBP10.03□□□□□ -0.8
SREBF1-215ENST00000487401 OR2H2O95918 312 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 OPN1MWP04001 364 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 ALDOBP05062 364 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 OPN1MW2P0DN77 364 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 OPN1MW3P0DN78 364 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 ZNF44P15621 663 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 HTR1DP28221 377 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 EMX1Q04741 257 aaPredicted RBP10.03□□□□□ -0.8
SREBF1-215ENST00000487401 IL18R1Q13478 541 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 GALEQ14376 348 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 HABP2Q14520 560 aaPredicted RBP10.03□□□□□ -0.8
SREBF1-215ENST00000487401 NSUN5P1Q3KNT7 163 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 LHFPL3Q86UP9 236 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 SAXO1Q8IYX7 474 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 Q8N2B8 174 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 ABHD12Q8N2K0 398 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 OR51A4Q8NGJ6 313 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 OR5D18Q8NGL1 313 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 OR5D14Q8NGL3 314 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 OR10AC1Q8NH08 325 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 CAPSLQ8WWF8 208 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 SPACA5Q96QH8 159 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 ALG8Q9BVK2 526 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 RHOFQ9HBH0 211 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 BATF3Q9NR55 127 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 AASSQ9UDR5 926 aa10.03□□□□□ -0.8
SREBF1-215ENST00000487401 IGKV1-12A0A0C4DH73 117 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 MEGF11A6BM72 1044 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 H3BNX3 289 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 TOR1AO14656 332 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 DEGS1O15121 323 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 MPZL2O60487 215 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 MMP23AO75900 390 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 IGKV1D-12P01611 117 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 HCKP08631 526 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 TMEM225BP0DP42 221 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 CD28P10747 220 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 CDK2P24941 298 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 ARHGDIBP52566 201 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 AESQ08117 197 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 MRPL28Q13084 256 aaKnown RBP10.02□□□□□ -0.81
SREBF1-215ENST00000487401 PRAMEF5Q5TYX0 476 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 RTN4RL2Q86UN3 420 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 SERPINA12Q8IW75 414 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 LYG1Q8N1E2 194 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 SYS1Q8N2H4 156 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 CHST4Q8NCG5 386 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 ZNF596Q8TC21 504 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 STMN2Q93045 179 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 OR5M11Q96RB7 305 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 C9orf16Q9BUW7 83 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 INPP5EQ9NRR6 644 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 SERTAD4Q9NUC0 356 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 ING3Q9NXR8 418 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 TAS2R3Q9NYW6 316 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 DPM3Q9P2X0 92 aa10.02□□□□□ -0.81
SREBF1-215ENST00000487401 A0A0G2JK05 382 aa10.01□□□□□ -0.81
SREBF1-215ENST00000487401 TMEM212A6NML5 194 aa10.01□□□□□ -0.81
SREBF1-215ENST00000487401 E9PQ18 207 aa10.01□□□□□ -0.81
SREBF1-215ENST00000487401 CCDC159P0C7I6 412 aa10.01□□□□□ -0.81
SREBF1-215ENST00000487401 DBTP11182 482 aaKnown RBP10.01□□□□□ -0.81
SREBF1-215ENST00000487401 JUNBP17275 347 aaPredicted RBP10.01□□□□□ -0.81
SREBF1-215ENST00000487401 BRS3P32247 399 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms