RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 ZNRD1Q9P1U0 126 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 ARID1AO14497 2285 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 AKAP9Q99996 3911 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 DOCK4Q8N1I0 1966 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 IGKV1-8A0A0C4DH67 115 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 K7EM74 188 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 SLC31A1O15431 190 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 MAGEB4O15481 346 aaPredicted RBP3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 AQP9O43315 295 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 GCM2O75603 506 aaPredicted RBP3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 PGA5P0DJD9 388 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 PTNP21246 168 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 CSKP41240 450 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 RBM34P42696 430 aaKnown RBP3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 ATP5J2P56134 94 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 MYL6P60660 151 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 LCN2P80188 198 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 LOXL1Q08397 574 aaPredicted RBP3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 DMTNQ08495 405 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 LINC00483Q53H64 154 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 AVPI1Q5T686 147 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 ZNF720Q7Z2F6 126 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 ZNF547Q8IVP9 402 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 C12orf29Q8N999 325 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 OR51L1Q8NGJ5 315 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 OR5AR1Q8NGP9 310 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 OR8U1Q8NH10 309 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 LILRB4Q8NHJ6 448 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 LMX1AQ8TE12 382 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 PDCD6IPQ8WUM4 868 aaKnown RBP3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 FAM131CQ96AQ9 280 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 RBMXL1Q96E39 390 aaKnown RBP3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 C8orf76Q96K31 380 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 UQCC2Q9BRT2 126 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 ZC4H2Q9NQZ6 224 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 ZNF355PQ9NSJ1 428 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 HMGXB4Q9UGU5 601 aa3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 TSSC4Q9Y5U2 329 aaPredicted RBP3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 NIPBLQ6KC79 2804 aaeCLIP3.02□□□□□ -1.93
PRPF38A-203ENST00000487160 SVILO95425 2214 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 A0A0J9YXV3 536 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 SPTY2D1-AS1A0A0U1RR47 76 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 ZNF233A6NK53 670 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 RAD51BO15315 384 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 XRCC2O43543 280 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 GMDSO60547 372 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 ZNF324O75467 553 aaPredicted RBP3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 SEMA3DO95025 777 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 NPPAP01160 153 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 TACSTD2P09758 323 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 RHOXF2BP0C7M4 288 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 PGA4P0DJD7 388 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 PGA3P0DJD8 388 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 TCP1P17987 556 aaKnown RBP3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 SYNJ2BPP57105 145 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 CCL7P80098 99 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 CDC20Q12834 499 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 SMUG1Q53HV7 270 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 TPRG1LQ5T0D9 272 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 ADNP2Q6IQ32 1131 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 NANOGP8Q6NSW7 305 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 Q6ZSR6 202 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 CALHM1Q8IU99 346 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 NKAIN4Q8IVV8 208 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 ZNF695Q8IW36 515 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 GATSQ8NAP1 163 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 GPR26Q8NDV2 337 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 OR5T3Q8NGG3 340 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 UBALD1Q8TB05 177 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 CCDC127Q96BQ5 260 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 TMA16Q96EY4 203 aaKnown RBP3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 CATSPER2Q96P56 530 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 CSPG4P5Q96PW8 444 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 CAMK2N2Q96S95 79 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 ZNF382Q96SR6 550 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 HSD17B10Q99714 261 aaKnown RBP3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 RHOXF2Q9BQY4 288 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 SLIRPQ9GZT3 109 aaKnown RBP3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 TCEAL2Q9H3H9 227 aaPredicted RBP3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 ZNF430Q9H8G1 570 aaPredicted RBP3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 MYOZ1Q9NP98 299 aaPredicted RBP3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 MED4Q9NPJ6 270 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 LZTFL1Q9NQ48 299 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 MCUBQ9NWR8 336 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 SLC17A7Q9P2U7 560 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 ZMAT5Q9UDW3 170 aaKnown RBP3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 STOML2Q9UJZ1 356 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 YTHDF2Q9Y5A9 579 aaKnown RBP3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 KPTNQ9Y664 436 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 PCNX1Q96RV3 2341 aa3.01□□□□□ -1.93
PRPF38A-203ENST00000487160 SMIM26A0A096LP01 95 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 A0A0U1RQV1 116 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 LOC100506127A0A0U1RQW1 187 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 DNASE2O00115 360 aaPredicted RBP3□□□□□ -1.93
PRPF38A-203ENST00000487160 ERI3O43414 337 aaKnown RBP3□□□□□ -1.93
PRPF38A-203ENST00000487160 FOXH1O75593 365 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 YIF1AO95070 293 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 IGKV3-11P04433 115 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 ADRA2AP08913 450 aa3□□□□□ -1.93
PRPF38A-203ENST00000487160 LCN1P31025 176 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms