RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 MEOX1P50221 254 aa15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 RNPS1Q15287 305 aaKnown RBP15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 TMEM200AQ86VY9 491 aa15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 SAXO1Q8IYX7 474 aa15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 LRTM2Q8N967 370 aa15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 LHFPL5Q8TAF8 219 aa15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 IP6K3Q96PC2 410 aa15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 SUCNR1Q9BXA5 334 aa15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 FGF23Q9GZV9 251 aaPredicted RBP15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 OR2S2Q9NQN1 319 aa15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 KLF13Q9Y2Y9 288 aaPredicted RBP15.48■□□□□ 0.07
PDLIM7-207ENST00000486828 NUDT19A8MXV4 375 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 NME2P1O60361 137 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 NME2P22392 152 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 ARR3P36575 388 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 ZNF273Q14593 569 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 CEACAM21Q3KPI0 293 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 SP6Q3SY56 376 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 ATRAIDQ6UW56 229 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 ZDHHC23Q8IYP9 409 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 HPSE2Q8WWQ2 592 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 ARL11Q969Q4 196 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 LRRC46Q96FV0 321 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 SLC2A9Q9NRM0 540 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 CRIM1Q9NZV1 1036 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 K7EPK0 472 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 SIGLEC5O15389 551 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 BCL3P20749 454 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 RPL12P30050 165 aaKnown RBP15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 BATF2Q8N1L9 274 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 FAM71E2Q8N5Q1 922 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 MDS2Q8NDY4 140 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 NARS2Q96I59 477 aaKnown RBP15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 SYT3Q9BQG1 590 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 ZC4H2Q9NQZ6 224 aa15.47■□□□□ 0.07
PDLIM7-207ENST00000486828 ZNHIT1O43257 154 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 HAAOP46952 286 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 RAB1AP62820 205 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 PHLDA2Q53GA4 152 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 RPL7L1Q6DKI1 246 aaKnown RBP15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 OR2A2Q6IF42 318 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 DHRS13Q6UX07 377 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 LIAT1Q6ZQX7 453 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 Q6ZS49 121 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 PIP4P1Q86T03 277 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 EXTL1Q92935 676 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 SLAMF9Q96A28 289 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 C18orf12Q96KH6 178 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 POM121L2Q96KW2 1035 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 FER1L6-AS2Q96M78 137 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 RSRP1Q9BUV0 290 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 LPAR3Q9UBY5 353 aa15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 LSM5Q9Y4Y9 91 aaKnown RBP15.46■□□□□ 0.07
PDLIM7-207ENST00000486828 PRSS44E7EML9 344 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 KLRC4-KLRK1H3BQV0 150 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 TNFSF15O95150 251 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 AADACP22760 399 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 GPM6AP51674 278 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 FGF12P61328 243 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 HERV-K104P61576 105 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 DEFA5Q01523 94 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 C3AR1Q16581 482 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 EIF5AL1Q6IS14 154 aaKnown RBP15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 NUFIP2Q7Z417 695 aaKnown RBP15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 MCEMP1Q8IX19 187 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 TAF9BQ9HBM6 251 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 TMEM218A2RU14 115 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 ZNF705EA8MWA4 302 aaPredicted RBP15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 H7C1Q1 480 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 ACTL6AO96019 429 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 SRSF7Q16629 238 aaKnown RBP eCLIP15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 MST1LQ2TV78 715 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 HES3Q5TGS1 186 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 CCDC71LQ8N9Z2 235 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 OR5L1Q8NGL2 311 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 OPA3Q9H6K4 179 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 MMP26Q9NRE1 261 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 PLSCR2Q9NRY7 297 aa15.45■□□□□ 0.06
PDLIM7-207ENST00000486828 NGFP01138 241 aa15.44■□□□□ 0.06
PDLIM7-207ENST00000486828 PPYP01298 95 aa15.44■□□□□ 0.06
PDLIM7-207ENST00000486828 PLP2Q04941 152 aa15.44■□□□□ 0.06
PDLIM7-207ENST00000486828 LYZL2Q7Z4W2 148 aa15.44■□□□□ 0.06
PDLIM7-207ENST00000486828 LGI3Q8N145 548 aa15.44■□□□□ 0.06
PDLIM7-207ENST00000486828 GLYATL2Q8WU03 294 aa15.44■□□□□ 0.06
PDLIM7-207ENST00000486828 MSI2Q96DH6 328 aaKnown RBP15.44■□□□□ 0.06
PDLIM7-207ENST00000486828 SAT2Q96F10 170 aaPredicted RBP15.44■□□□□ 0.06
PDLIM7-207ENST00000486828 PLEKHA2Q9HB19 425 aa15.44■□□□□ 0.06
PDLIM7-207ENST00000486828 AMDHD2Q9Y303 409 aa15.44■□□□□ 0.06
PDLIM7-207ENST00000486828 TNRC6AQ8NDV7 1962 aaKnown RBP15.44■□□□□ 0.06
PDLIM7-207ENST00000486828 FREM1Q5H8C1 2179 aa15.43■□□□□ 0.06
PDLIM7-207ENST00000486828 ZNF732B4DXR9 585 aa15.43■□□□□ 0.06
PDLIM7-207ENST00000486828 SCGB1D2O95969 90 aa15.43■□□□□ 0.06
PDLIM7-207ENST00000486828 MBPP02686 304 aaPredicted RBP15.43■□□□□ 0.06
PDLIM7-207ENST00000486828 GAPDHP04406 335 aaKnown RBP15.43■□□□□ 0.06
PDLIM7-207ENST00000486828 ATF4P18848 351 aaPredicted RBP15.43■□□□□ 0.06
PDLIM7-207ENST00000486828 SLC10A1Q14973 349 aa15.43■□□□□ 0.06
PDLIM7-207ENST00000486828 TMEM268Q5VZI3 342 aa15.43■□□□□ 0.06
PDLIM7-207ENST00000486828 IL34Q6ZMJ4 242 aa15.43■□□□□ 0.06
PDLIM7-207ENST00000486828 MKXQ8IYA7 352 aa15.43■□□□□ 0.06
PDLIM7-207ENST00000486828 OR5T2Q8NGG2 359 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms