RNA–Protein interactions for RNA: ENST00000486572.1

COL1A1-207, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 836 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-207ENST00000486572 SIRPB1O00241 398 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 PSPNO60542 156 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 OR2H2O95918 312 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 TGFBR2P37173 567 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 PTGFRP43088 359 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 EDDM3BP56851 147 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 GUCA2AQ02747 115 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 RSU1Q15404 277 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 GRK1Q15835 563 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 NCR3LG1Q68D85 454 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 ELP2Q6IA86 826 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 MS4A15Q8N5U1 240 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 PPP1R35Q8TAP8 253 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 TNFRSF14Q92956 283 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 NKX3-1Q99801 234 aaPredicted RBP14.93□□□□□ -0.02
COL1A1-207ENST00000486572 CHST6Q9GZX3 395 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 FOXJ3Q9UPW0 622 aa14.93□□□□□ -0.02
COL1A1-207ENST00000486572 MDFIC2A0A1B0GVS7 189 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 MAGEA13PA6NCF6 341 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 DNAJC9-AS1A6NH13 148 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 RNASEK-C17orf49H0YIS7 233 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 ZNF44P15621 663 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 PRTN3P24158 256 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 EEF1B2P24534 225 aaKnown RBP14.92□□□□□ -0.02
COL1A1-207ENST00000486572 OR3A1P47881 315 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 DLX1P56177 255 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 UBA52P62987 128 aaKnown RBP14.92□□□□□ -0.02
COL1A1-207ENST00000486572 PRB3Q04118 309 aaPredicted RBP14.92□□□□□ -0.02
COL1A1-207ENST00000486572 BAMBIQ13145 260 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 GPR50Q13585 617 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 EDDM3AQ14507 147 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 ZNF273Q14593 569 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 DEFB112Q30KQ8 113 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 ASCL4Q6XD76 172 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.92□□□□□ -0.02
COL1A1-207ENST00000486572 CHST4Q8NCG5 386 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 OR4S1Q8NGB4 309 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 SPATA3Q8NHX4 192 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 UFD1Q92890 307 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 TMED9Q9BVK6 235 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 ZMAT3Q9HA38 289 aaKnown RBP14.92□□□□□ -0.02
COL1A1-207ENST00000486572 NOX4Q9NPH5 578 aa14.92□□□□□ -0.02
COL1A1-207ENST00000486572 hCG_1809904A0A1W2PP81 198 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 A0A1W2PPE2 198 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 A0A1W2PR64 198 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 A0A1W2PRV1 198 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 MGST3O14880 152 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 PIN1P1O15428 100 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 HSMCR30P0CW71 290 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 CCL3L1P16619 93 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 LMO1P25800 156 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 MEF2CQ06413 473 aaPredicted RBP14.91□□□□□ -0.02
COL1A1-207ENST00000486572 KLRD1Q13241 179 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 TBCEQ15813 527 aaPredicted RBP14.91□□□□□ -0.02
COL1A1-207ENST00000486572 PIP4P2Q8N4L2 257 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 OR10K1Q8NGX5 313 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 FAM216AQ8WUB2 273 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 ZDHHC16Q969W1 377 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 S100A13Q99584 98 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 METTL9Q9H1A3 318 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 PRDM13Q9H4Q3 707 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 ISYNA1Q9NPH2 558 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 IL36GQ9NZH8 169 aa14.91□□□□□ -0.02
COL1A1-207ENST00000486572 hADV38S2A0JD32 116 aa14.9□□□□□ -0.02
COL1A1-207ENST00000486572 DENRO43583 198 aaKnown RBP14.9□□□□□ -0.02
COL1A1-207ENST00000486572 CDRT1O95170 752 aa14.9□□□□□ -0.02
COL1A1-207ENST00000486572 MAS1P04201 325 aa14.9□□□□□ -0.02
COL1A1-207ENST00000486572 UBE2E1P51965 193 aa14.9□□□□□ -0.02
COL1A1-207ENST00000486572 SCN1BQ07699 218 aa14.9□□□□□ -0.02
COL1A1-207ENST00000486572 MLLT11Q13015 90 aaPredicted RBP14.9□□□□□ -0.02
COL1A1-207ENST00000486572 INSL4Q14641 139 aa14.9□□□□□ -0.02
COL1A1-207ENST00000486572 ACSM3Q53FZ2 586 aa14.9□□□□□ -0.02
COL1A1-207ENST00000486572 LIPKQ5VXJ0 399 aa14.9□□□□□ -0.02
COL1A1-207ENST00000486572 Q6P435 159 aa14.9□□□□□ -0.02
COL1A1-207ENST00000486572 NKAIN3Q8N8D7 197 aa14.9□□□□□ -0.02
COL1A1-207ENST00000486572 Q8NFD4 153 aa14.9□□□□□ -0.02
COL1A1-207ENST00000486572 OR51T1Q8NGJ9 327 aa14.9□□□□□ -0.02
COL1A1-207ENST00000486572 C1orf147Q96MC9 270 aaPredicted RBP14.9□□□□□ -0.02
COL1A1-207ENST00000486572 DUX5Q96PT3 197 aa14.9□□□□□ -0.02
COL1A1-207ENST00000486572 ING4Q9UNL4 249 aa14.9□□□□□ -0.02
COL1A1-207ENST00000486572 A0A0G2JK05 382 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 A0A0U1RQK1 487 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 CLDN34H7C241 214 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 SLC33A1O00400 549 aaPredicted RBP14.89□□□□□ -0.03
COL1A1-207ENST00000486572 DEGS1O15121 323 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 NPFFO15130 113 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 HTR3BO95264 441 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 CSTBP04080 98 aaKnown RBP14.89□□□□□ -0.03
COL1A1-207ENST00000486572 ZNF728P0DKX0 622 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 ERP29P30040 261 aaKnown RBP14.89□□□□□ -0.03
COL1A1-207ENST00000486572 MAP2K4P45985 399 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 DLX6P56179 175 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 P2RX3P56373 397 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 GABARAPL2P60520 117 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 TPBGQ13641 420 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 IL13RA2Q14627 380 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 UNQ9370/PRO34162Q6UXP9 181 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 TCF23Q7RTU1 214 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 CDH26Q8IXH8 852 aa14.89□□□□□ -0.03
COL1A1-207ENST00000486572 JAGN1Q8N5M9 183 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms