RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 HAND1O96004 215 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 IGKV1D-12P01611 117 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 ZNF728P0DKX0 622 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 PIPP12273 146 aaPredicted RBP5.7□□□□□ -1.5
VPS50-218ENST00000485994 SAA4P35542 130 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 NPBWR2P48146 333 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 CAPZA1P52907 286 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 ZP1P60852 638 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 PAX5Q02548 391 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 MED21Q13503 144 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 RCN1Q15293 331 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 KISS1Q15726 138 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 PRR31Q5SQ13 230 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 OGFRL1Q5TC84 451 aaPredicted RBP5.7□□□□□ -1.5
VPS50-218ENST00000485994 OLFML2AQ68BL7 652 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 GDPD3Q7L5L3 318 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 CHST4Q8NCG5 386 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 ZNF485Q8NCK3 441 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 OR52N4Q8NGI2 321 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 OR51T1Q8NGJ9 327 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 OR13C3Q8NGS6 347 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 OR10AC1Q8NH08 325 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 SLAMF9Q96A28 289 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 MALSU1Q96EH3 234 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 CPNE2Q96FN4 548 aaPredicted RBP5.7□□□□□ -1.5
VPS50-218ENST00000485994 DCLRE1BQ9H816 532 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 ELL3Q9HB65 397 aaPredicted RBP5.7□□□□□ -1.5
VPS50-218ENST00000485994 TAS2R3Q9NYW6 316 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 CNOT2Q9NZN8 540 aaKnown RBP5.7□□□□□ -1.5
VPS50-218ENST00000485994 OR14J1Q9UGF5 321 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 UBE2J1Q9Y385 318 aaPredicted RBP5.7□□□□□ -1.5
VPS50-218ENST00000485994 EXOSC1Q9Y3B2 195 aaKnown RBP5.7□□□□□ -1.5
VPS50-218ENST00000485994 TBL2Q9Y4P3 447 aaKnown RBP5.7□□□□□ -1.5
VPS50-218ENST00000485994 LINC00312Q9Y6C7 94 aa5.7□□□□□ -1.5
VPS50-218ENST00000485994 MEIOCA2RUB1 952 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 BTBD17A6NE02 478 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 EFCAB10A6NFE3 127 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 ODF3BA8MYP8 253 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 GPR137BO60478 399 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 PSPNO60542 156 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 IGHV4-59P01825 116 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 CD2P06729 351 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 CGB3P0DN86 165 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 CGB7P0DN87 165 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 IGHV1-8P0DP01 117 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 BCL3P20749 454 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 MDKP21741 143 aaPredicted RBP5.69□□□□□ -1.5
VPS50-218ENST00000485994 KIR2DS4P43632 304 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 MTNR1BP49286 362 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 CEBPDP49716 269 aaPredicted RBP5.69□□□□□ -1.5
VPS50-218ENST00000485994 ETV1P50549 477 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 DYNLT3P51808 116 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 RAG2P55895 527 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 ZNF273Q14593 569 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 CDK5R1Q15078 307 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 TAF9Q16594 264 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 SMN1Q16637 294 aaKnown RBP5.69□□□□□ -1.5
VPS50-218ENST00000485994 MINOS1Q5TGZ0 78 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 RNLSQ5VYX0 342 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 ZNF626Q68DY1 528 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 DMKNQ6E0U4 476 aaPredicted RBP5.69□□□□□ -1.5
VPS50-218ENST00000485994 Q6P435 159 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 CDH26Q8IXH8 852 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 FAM185AQ8N0U4 392 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 ASCC1Q8N9N2 400 aaKnown RBP5.69□□□□□ -1.5
VPS50-218ENST00000485994 OR4M1Q8NGD0 313 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 OR13C9Q8NGT0 318 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 OR13D1Q8NGV5 346 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 OR52N1Q8NH53 320 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 LINC01006Q8NI28 216 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 PIFOQ8TCI5 191 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 GPR148Q8TDV2 347 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 NRG4Q8WWG1 115 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 TFAP2CQ92754 450 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 GGHQ92820 318 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 EMG1Q92979 244 aaKnown RBP5.69□□□□□ -1.5
VPS50-218ENST00000485994 TMEM80Q96HE8 168 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 ZNF714Q96N38 554 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 SSX3Q99909 188 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 CITED1Q99966 193 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 PDCD1LG2Q9BQ51 273 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 RAB18Q9NP72 206 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 RBFOX1Q9NWB1 397 aaKnown RBP5.69□□□□□ -1.5
VPS50-218ENST00000485994 FBLN5Q9UBX5 448 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 VPREB3Q9UKI3 123 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 DHDHQ9UQ10 334 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 ZNF281Q9Y2X9 895 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 PCDHGB5Q9Y5G0 923 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 MINOS1-NBL1R4GNA1 71 aa5.69□□□□□ -1.5
VPS50-218ENST00000485994 A0A0G2JK05 382 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 TRBV5-5A0A0J9YX44 114 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 H3BSH0 61 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 MAGEB3O15480 346 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 SPRY1O43609 319 aaPredicted RBP5.68□□□□□ -1.5
VPS50-218ENST00000485994 ANGPTL7O43827 346 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 INMTO95050 263 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 OR2H2O95918 312 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 PAHP00439 452 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 OCM2P0CE71 109 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 OCMP0CE72 109 aaPredicted RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms