RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 ZSCAN4Q8NAM6 433 aaPredicted RBP3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 OR2T33Q8NG76 320 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 OR4M2Q8NGB6 313 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 OR10G3Q8NGC4 313 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 OR5AR1Q8NGP9 310 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 KIR2DL5BQ8NHK3 375 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 NEIL3Q8TAT5 605 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 PLPPR1Q8TBJ4 325 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 XAGE5Q8WWM1 108 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 ASB17Q8WXJ9 295 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 BPIFA2Q96DR5 249 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 MS4A6EQ96DS6 147 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 CNRIP1Q96F85 164 aaPredicted RBP3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 CPNE2Q96FN4 548 aaPredicted RBP3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 SCMH1Q96GD3 660 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 WDYHV1Q96HA8 205 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 HYLS1Q96M11 299 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 UHRF2Q96PU4 802 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 CLCC1Q96S66 551 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 PDCD10Q9BUL8 212 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 GGACTQ9BVM4 153 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 TXNIPQ9H3M7 391 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 UBE2ZQ9H832 354 aaPredicted RBP3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 MCUBQ9NWR8 336 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 B3GNT2Q9NY97 397 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 KLRF1Q9NZS2 232 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 COPZ2Q9P299 210 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 GAGE2DQ9UEU5 116 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 SLC23A2Q9UGH3 650 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 NUFIP1Q9UHK0 495 aaKnown RBP3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 ZNF223Q9UK11 482 aaPredicted RBP3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 BAIAP2Q9UQB8 552 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 C14orf166Q9Y224 244 aaKnown RBP3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 NSG2Q9Y328 171 aa3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 PCYT1BQ9Y5K3 369 aaPredicted RBP3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 PRRC2BQ5JSZ5 2229 aaKnown RBP3.45□□□□□ -1.86
PRPF38B-205ENST00000485810 NOTCH4Q99466 2003 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 CCDC88CQ9P219 2028 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 MYOFQ9NZM1 2061 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 NSG1A0A0A6YYJ2 146 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 TRAV1-2A0A0B4J238 106 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 A0A0G2JK05 382 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 ZNF816-ZNF321PA0A0X1KG74 233 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 A0A1B0GUS0 222 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 C9orf170A2RU37 121 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 SMIM9A6NGZ8 99 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 C17orf105B2RV13 164 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 INMT-MINDY4F8WBC2 141 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 K7EN84 100 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 SLC17A3O00476 420 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 CCL16O15467 120 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 FGF16O43320 207 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 SPRY2O43597 315 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 GSTZ1O43708 216 aaPredicted RBP3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 TRIAP1O43715 76 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 CTSVO60911 334 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 ZNF780AO75290 641 aaPredicted RBP3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 MPDU1O75352 247 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 ATP5LO75964 103 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 LYPD3O95274 346 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 AIFM1O95831 613 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 IFNA1P01562 189 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 TYMSP04818 313 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 IGF1P05019 195 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 GIPP09681 153 aaPredicted RBP3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 MGMTP16455 207 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 PGCP20142 388 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 ATP5A1P25705 553 aaKnown RBP3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 CEACAM6P40199 344 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 RFC3P40938 356 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 AKR1C3P42330 323 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 RPL35P42766 123 aaKnown RBP3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 SSR2P43308 183 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 SULT1A1P50225 295 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 SULT1A2P50226 295 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 CTBP2P56545 445 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 CLDN15P56746 228 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 TMPRSS3P57727 454 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 STXBP1P61764 594 aaKnown RBP3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 RPL32P62910 135 aaKnown RBP3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 ID2Q02363 134 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 OC90Q02509 493 aaPredicted RBP3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 KLRB1Q12918 225 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 BIKQ13323 160 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 ATXN7L3Q14CW9 347 aaPredicted RBP3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 MLF2Q15773 248 aaPredicted RBP3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 GRK1Q15835 563 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 TAL2Q16559 108 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 C14orf28Q4W4Y0 310 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 ESCO2Q56NI9 601 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 PYDC2Q56P42 97 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 ZNF542PQ5EBM4 170 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 VWA2Q5GFL6 755 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 DMRTC1Q5HYR2 192 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 ACTL10Q5JWF8 245 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 LAMTOR1Q6IAA8 161 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 PWWP2BQ6NUJ5 590 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 SMARCD3Q6STE5 483 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 PAMR1Q6UXH9 720 aa3.44□□□□□ -1.86
PRPF38B-205ENST00000485810 BAIAP2L2Q6UXY1 529 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms