RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 ZFAND6Q6FIF0 208 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 OR10K2Q6IF99 312 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 WDR82Q6UXN9 313 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 ADAMTSL5Q6ZMM2 481 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 OR2L13Q8N349 312 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 PRR26Q8N8Z3 221 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 CHST4Q8NCG5 386 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 SLC30A7Q8NEW0 376 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 BEST4Q8NFU0 473 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 OR7A2PQ8NGA2 310 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 OR2K2Q8NGT1 345 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 OR2G2Q8NGZ5 317 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 FGFBP3Q8TAT2 258 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 FBXO25Q8TCJ0 367 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 GATAD1Q8WUU5 269 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 ORAOV1Q8WV07 137 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 MBD3L1Q8WWY6 194 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 ASB13Q8WXK3 278 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 DCUN1D4Q92564 292 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 MAGOHBQ96A72 148 aaKnown RBP3.79□□□□□ -1.8
RTN4-213ENST00000485749 BORCS7Q96B45 105 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 OR52E6Q96RD3 313 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 AGMATQ9BSE5 352 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 PBDC1Q9BVG4 233 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 ULBP3Q9BZM4 244 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 ARRDC1-AS1Q9H2J1 176 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 NRN1Q9NPD7 142 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 ZNF224Q9NZL3 707 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 THAP10Q9P2Z0 257 aaPredicted RBP3.79□□□□□ -1.8
RTN4-213ENST00000485749 CES1P1Q9UKY3 287 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 POLR1DQ9Y2S0 133 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 ZNF780BQ9Y6R6 833 aa3.79□□□□□ -1.8
RTN4-213ENST00000485749 TNS3Q68CZ2 1445 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 DDX60Q8IY21 1712 aaKnown RBP3.78□□□□□ -1.8
RTN4-213ENST00000485749 MARF1Q9Y4F3 1742 aaKnown RBP3.78□□□□□ -1.8
RTN4-213ENST00000485749 MEIKINA0A087WXM9 373 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 A0A1B0GV50 99 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 A0A1W2PRE2 83 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 GLTPD2A6NH11 291 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 OR5H1A6NKK0 313 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 KRTAP29-1A8MX34 341 aaPredicted RBP3.78□□□□□ -1.8
RTN4-213ENST00000485749 LEUTXA8MZ59 168 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 H3BMQ9 156 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 TNFRSF11BO00300 401 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 FCN1O00602 326 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 RDH16O75452 317 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 CA11O75493 328 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 CLDN1O95832 211 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 TBX6O95947 436 aaPredicted RBP3.78□□□□□ -1.8
RTN4-213ENST00000485749 CD8AP01732 235 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 SEMG1P04279 462 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 EDN1P05305 212 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 HSD17B1P14061 328 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 PVRP15151 417 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 COX5AP20674 150 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 CBLP22681 906 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 PSMB9P28065 219 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 RAB5CP51148 216 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 TDGF1P3P51864 188 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 EMP1P54849 157 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 PPP1CBP62140 327 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 RPS14P62263 151 aaKnown RBP3.78□□□□□ -1.8
RTN4-213ENST00000485749 RPL8P62917 257 aaKnown RBP3.78□□□□□ -1.8
RTN4-213ENST00000485749 SELENOWP63302 87 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 SLC35A2P78381 396 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 FKBP3Q00688 224 aaKnown RBP3.78□□□□□ -1.8
RTN4-213ENST00000485749 BTN1A1Q13410 526 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 C16orf72Q14CZ0 275 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 DAZAP2Q15038 168 aaPredicted RBP3.78□□□□□ -1.8
RTN4-213ENST00000485749 RHEBQ15382 184 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 ATP6AP1LQ52LC2 224 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 TPTE2P1Q5T6R2 138 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 TRNP1Q6NT89 227 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 TEX261Q6UWH6 196 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 Q6ZSV7 163 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 BHLHA9Q7RTU4 235 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 DEFB128Q7Z7B8 93 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 MRPL55Q7Z7F7 128 aaKnown RBP3.78□□□□□ -1.8
RTN4-213ENST00000485749 LINC01561Q8N1V8 128 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 GBGT1Q8N5D6 347 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 SPICQ8N5J4 248 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 COX18Q8N8Q8 333 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 KLHDC9Q8NEP7 349 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 ZFP90Q8TF47 636 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 ZNF681Q96N22 645 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 SULT4A1Q9BR01 284 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 TMEM70Q9BUB7 260 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 SLC25A39Q9BZJ4 359 aaPredicted RBP3.78□□□□□ -1.8
RTN4-213ENST00000485749 R3HDMLQ9H3Y0 253 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 PPDPFQ9H3Y8 114 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 FBXL15Q9H469 300 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 REEP1Q9H902 201 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 C3orf14Q9HBI5 128 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 MEPEQ9NQ76 525 aaPredicted RBP3.78□□□□□ -1.8
RTN4-213ENST00000485749 MED29Q9NX70 200 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 THYN1Q9P016 225 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 MED11Q9P086 117 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 RAB22AQ9UL26 194 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 TRAPPC2LQ9UL33 140 aa3.78□□□□□ -1.8
RTN4-213ENST00000485749 RPL26L1Q9UNX3 145 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms