RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 SPSB1Q96BD6 273 aa10.69□□□□□ -0.7
UBA3-210ENST00000485424 FGGYQ96C11 551 aa10.69□□□□□ -0.7
UBA3-210ENST00000485424 AKR1E2Q96JD6 320 aa10.69□□□□□ -0.7
UBA3-210ENST00000485424 OPALINQ96PE5 141 aa10.69□□□□□ -0.7
UBA3-210ENST00000485424 OR4F4Q96R69 305 aa10.69□□□□□ -0.7
UBA3-210ENST00000485424 OR5M11Q96RB7 305 aa10.69□□□□□ -0.7
UBA3-210ENST00000485424 TMEM133Q9H2Q1 129 aa10.69□□□□□ -0.7
UBA3-210ENST00000485424 ZNF702PQ9H963 129 aa10.69□□□□□ -0.7
UBA3-210ENST00000485424 RBFOX1Q9NWB1 397 aaKnown RBP10.69□□□□□ -0.7
UBA3-210ENST00000485424 HHLA2Q9UM44 414 aa10.69□□□□□ -0.7
UBA3-210ENST00000485424 GSTK1Q9Y2Q3 226 aa10.69□□□□□ -0.7
UBA3-210ENST00000485424 TRGV10A0A0A0MS01 117 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 TMEM82A0PJX8 343 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 A6NDX4 124 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 SIRPB1O00241 398 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 CALCBP10092 127 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 HTR1DP28221 377 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 BRS3P32247 399 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 KIR3DL2P43630 455 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 SCN1BQ07699 218 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 KPNB1Q14974 876 aaKnown RBP10.68□□□□□ -0.7
UBA3-210ENST00000485424 MEDAGQ5VYS4 303 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 UTS2BQ765I0 119 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 NDUFA11Q86Y39 141 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 OR52N4Q8NGI2 321 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 OR2G2Q8NGZ5 317 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 ZNF596Q8TC21 504 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 R3HDM4Q96D70 268 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 RNFT2Q96EX2 444 aa10.68□□□□□ -0.7
UBA3-210ENST00000485424 ADAT3Q96EY9 351 aaPredicted RBP10.68□□□□□ -0.7
UBA3-210ENST00000485424 UBE2J1Q9Y385 318 aaPredicted RBP10.68□□□□□ -0.7
UBA3-210ENST00000485424 J3QLW9 94 aa10.67□□□□□ -0.7
UBA3-210ENST00000485424 TOR1AO14656 332 aa10.67□□□□□ -0.7
UBA3-210ENST00000485424 PSPNO60542 156 aa10.67□□□□□ -0.7
UBA3-210ENST00000485424 ENTPD6O75354 484 aa10.67□□□□□ -0.7
UBA3-210ENST00000485424 HCKP08631 526 aa10.67□□□□□ -0.7
UBA3-210ENST00000485424 CD28P10747 220 aa10.67□□□□□ -0.7
UBA3-210ENST00000485424 ZNF44P15621 663 aa10.67□□□□□ -0.7
UBA3-210ENST00000485424 ZNF19P17023 458 aa10.67□□□□□ -0.7
UBA3-210ENST00000485424 ERP29P30040 261 aaKnown RBP10.67□□□□□ -0.7
UBA3-210ENST00000485424 NPBWR2P48146 333 aa10.67□□□□□ -0.7
UBA3-210ENST00000485424 DYNLT3P51808 116 aa10.67□□□□□ -0.7
UBA3-210ENST00000485424 P2RX3P56373 397 aa10.67□□□□□ -0.7
UBA3-210ENST00000485424 ZNF146Q15072 292 aa10.67□□□□□ -0.7
UBA3-210ENST00000485424 CCBE1Q6UXH8 406 aaPredicted RBP10.67□□□□□ -0.7
UBA3-210ENST00000485424 REC114Q7Z4M0 266 aa10.67□□□□□ -0.7
UBA3-210ENST00000485424 SEBOXQ9HB31 216 aaPredicted RBP10.67□□□□□ -0.7
UBA3-210ENST00000485424 SERTAD4Q9NUC0 356 aa10.67□□□□□ -0.7
UBA3-210ENST00000485424 IL36RNQ9UBH0 155 aa10.67□□□□□ -0.7
UBA3-210ENST00000485424 SLC16A6O15403 523 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 ALX3O95076 343 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 OR2H2O95918 312 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 ISG15P05161 165 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 RPSAP08865 295 aaKnown RBP10.66□□□□□ -0.7
UBA3-210ENST00000485424 CEACAM3P40198 252 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 ISL1P61371 349 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 PDZK1IP1Q13113 114 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 ZIK1Q3SY52 487 aaPredicted RBP10.66□□□□□ -0.7
UBA3-210ENST00000485424 TCF23Q7RTU1 214 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 C16orf82Q7Z2V1 217 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 RTN4RL2Q86UN3 420 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 Q8N2B8 174 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 ABHD12Q8N2K0 398 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 ACBD7Q8N6N7 88 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 OR4D6Q8NGJ1 314 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 OR5D18Q8NGL1 313 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 PYDC1Q8WXC3 89 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 SGCDQ92629 289 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 C4orf36Q96KX1 117 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 COMMD4Q9H0A8 199 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 RHOFQ9HBH0 211 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 HMG20AQ9NP66 347 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 ING3Q9NXR8 418 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 FRRS1LQ9P0K9 344 aa10.66□□□□□ -0.7
UBA3-210ENST00000485424 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.66□□□□□ -0.7
UBA3-210ENST00000485424 IGKV1-9A0A0C4DH69 117 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 TMEM225BP0DP42 221 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 PF4V1P10720 104 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 PTGFRP43088 359 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 OR3A1P47881 315 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 CCR9P51686 369 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 PRRX1P54821 245 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 ALKBH1Q13686 389 aaKnown RBP10.65□□□□□ -0.7
UBA3-210ENST00000485424 PRAMEF5Q5TYX0 476 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 CENPVQ7Z7K6 275 aaPredicted RBP10.65□□□□□ -0.7
UBA3-210ENST00000485424 OR13C9Q8NGT0 318 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 CREB3L1Q96BA8 519 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 CPNE2Q96FN4 548 aaPredicted RBP10.65□□□□□ -0.7
UBA3-210ENST00000485424 HRASLS5Q96KN8 279 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 SPACA5Q96QH8 159 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 MBOAT4Q96T53 435 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 CITED2Q99967 270 aaPredicted RBP10.65□□□□□ -0.7
UBA3-210ENST00000485424 MMP28Q9H239 520 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 ZCCHC4Q9H5U6 513 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 TAS2R3Q9NYW6 316 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 DPM3Q9P2X0 92 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 TENM3Q9P273 2699 aa10.65□□□□□ -0.7
UBA3-210ENST00000485424 A0A1W2PRX2 142 aa10.64□□□□□ -0.71
UBA3-210ENST00000485424 FAM172BPA6NC97 362 aa10.64□□□□□ -0.71
UBA3-210ENST00000485424 LEUTXA8MZ59 168 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms