RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 OPN4Q9UHM6 478 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 ZNF222Q9UK12 451 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 FOXJ3Q9UPW0 622 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 LRRC42Q9Y546 428 aa7.37□□□□□ -1.23
COL8A1-207ENST00000483969 IGKV1D-17A0A075B6S4 117 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 A0A1W2PPH5 198 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 SH2D1BO14796 132 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 SPRY1O43609 319 aaPredicted RBP7.36□□□□□ -1.23
COL8A1-207ENST00000483969 KDM4BO94953 1096 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 HSMCR30P0CW71 290 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 NDUFB7P17568 137 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 GABARAPL2P60520 117 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 RPS11P62280 158 aaKnown RBP eCLIP7.36□□□□□ -1.23
COL8A1-207ENST00000483969 FOXE3Q13461 319 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 TPBGQ13641 420 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 DGUOKQ16854 277 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 ACSM3Q53FZ2 586 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 UNQ9370/PRO34162Q6UXP9 181 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 CDH26Q8IXH8 852 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 CMTM4Q8IZR5 234 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 CD177Q8N6Q3 437 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 ZNRF1Q8ND25 227 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 LY6G5BQ8NDX9 201 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 TMEM185AQ8NFB2 350 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 PXT1Q8NFP0 134 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 OR5D13Q8NGL4 314 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 PPP1R35Q8TAP8 253 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 H1FXQ92522 213 aaKnown RBP7.36□□□□□ -1.23
COL8A1-207ENST00000483969 SGCDQ92629 289 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 RFT1Q96AA3 541 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 SPACA5Q96QH8 159 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 S100A13Q99584 98 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 DCTN5Q9BTE1 182 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 FAM234AQ9H0X4 552 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 SMURF1Q9HCE7 757 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 HMG20AQ9NP66 347 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 RPUSD1Q9UJJ7 312 aaKnown RBP7.36□□□□□ -1.23
COL8A1-207ENST00000483969 LSM2Q9Y333 95 aaKnown RBP7.36□□□□□ -1.23
COL8A1-207ENST00000483969 MAB21L2Q9Y586 359 aa7.36□□□□□ -1.23
COL8A1-207ENST00000483969 F8P00451 2351 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 RTTNQ86VV8 2226 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 TRBV5-7A0A0A0MS05 114 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 TRBV23-1A0A0A0MS06 115 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 A0A1W2PPK0 400 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 ANGPTL7O43827 346 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 TOX4O94842 621 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 PRKACAP17612 351 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 IGFBP3P17936 291 aaPredicted RBP7.35□□□□□ -1.23
COL8A1-207ENST00000483969 BCL3P20749 454 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 PSMA1P25786 263 aaKnown RBP7.35□□□□□ -1.23
COL8A1-207ENST00000483969 ZNF93P35789 620 aaPredicted RBP7.35□□□□□ -1.23
COL8A1-207ENST00000483969 PTGFRP43088 359 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 NPBWR2P48146 333 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 BPIFB3P59826 476 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 FGF12P61328 243 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 ARF6P62330 175 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 MLLT11Q13015 90 aaPredicted RBP7.35□□□□□ -1.23
COL8A1-207ENST00000483969 BLMHQ13867 455 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 ZNF146Q15072 292 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 PDCD1Q15116 288 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 ARMCX4Q5H9R4 360 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 SPIN3Q5JUX0 258 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 DDI2Q5TDH0 399 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 METTL11BQ5VVY1 283 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 C1orf122Q6ZSJ8 110 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 CEACAM19Q7Z692 300 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 BATF2Q8N1L9 274 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 OR52N4Q8NGI2 321 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 OR5D18Q8NGL1 313 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 OR13C5Q8NGS8 318 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 TNFAIP8L1Q8WVP5 186 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 PHYHIPQ92561 330 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 UPRTQ96BW1 309 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 SNX22Q96L94 193 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 WDFY2Q96P53 400 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 DERL3Q96Q80 235 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 OR14A2Q96R54 314 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 MGLLQ99685 303 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 TMED9Q9BVK6 235 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 SLITRK2Q9H156 845 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 METTL9Q9H1A3 318 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 ELL3Q9HB65 397 aaPredicted RBP7.35□□□□□ -1.23
COL8A1-207ENST00000483969 TCF7L1Q9HCS4 588 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 NUP50Q9UKX7 468 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 ING4Q9UNL4 249 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 KPTNQ9Y664 436 aa7.35□□□□□ -1.23
COL8A1-207ENST00000483969 MAP1AP78559 2803 aaPredicted RBP7.35□□□□□ -1.23
COL8A1-207ENST00000483969 CELSR1Q9NYQ6 3014 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 A0A0A6YYJ9 748 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 IGKV1-12A0A0C4DH73 117 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 A0A1B0GW55 424 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 hCG_1809904A0A1W2PP81 198 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 A0A1W2PPE2 198 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 A0A1W2PQ09 198 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 A0A1W2PR64 198 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 A0A1W2PRV1 198 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 F8VVB4 439 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 F8VWA3 439 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 K7N7A8 449 aa7.34□□□□□ -1.23
COL8A1-207ENST00000483969 GABRPO00591 440 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms