RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 PEX2P28328 305 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 DUSP1P28562 367 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 RIDAP52758 137 aaKnown RBP5.86□□□□□ -1.47
CSDE1-206ENST00000483030 RPL23AP62750 156 aaKnown RBP5.86□□□□□ -1.47
CSDE1-206ENST00000483030 DGCR2P98153 550 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 CDK5Q00535 292 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 BDH1Q02338 343 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 ZNF829Q3KNS6 432 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-206ENST00000483030 FAM98BQ52LJ0 330 aaKnown RBP5.86□□□□□ -1.47
CSDE1-206ENST00000483030 SLX4IPQ5VYV7 408 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 TMEM236Q5W0B7 351 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 TRAPPC6BQ86SZ2 158 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 ELMOD2Q8IZ81 293 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 OSR2Q8N2R0 312 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 OR51D1Q8NGF3 324 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 OR52N4Q8NGI2 321 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 OR14K1Q8NGZ2 314 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 ASB17Q8WXJ9 295 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 SLAMF9Q96A28 289 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 CEP19Q96LK0 163 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 APOL4Q9BPW4 351 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 MCRIP2Q9BUT9 160 aaKnown RBP5.86□□□□□ -1.47
CSDE1-206ENST00000483030 CADM1Q9BY67 442 aaKnown RBP5.86□□□□□ -1.47
CSDE1-206ENST00000483030 CHST6Q9GZX3 395 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 ARL8BQ9NVJ2 186 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 IL36RNQ9UBH0 155 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 HHLA2Q9UM44 414 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 COPS3Q9UNS2 423 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 SLC7A11Q9UPY5 501 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 PCDHGB5Q9Y5G0 923 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 V9GYS6 101 aa5.86□□□□□ -1.47
CSDE1-206ENST00000483030 IGKV1-27A0A075B6S5 117 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 FAM172BPA6NC97 362 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 ARRDC5A6NEK1 342 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 NUDT19A8MXV4 375 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 C3orf84H3BNL1 204 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 H3BSH0 61 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 PSPNO60542 156 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 SRSF10O75494 262 aaKnown RBP5.85□□□□□ -1.47
CSDE1-206ENST00000483030 HAND1O96004 215 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 CALCBP10092 127 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 OSMP13725 252 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 CDK2P24941 298 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 MYCNOSP40205 109 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 ARHGDIBP52566 201 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 UBE2V2Q15819 145 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 SNAPC1Q16533 368 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 SPATS1Q496A3 300 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 NKAPLQ5M9Q1 402 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 BCL2L15Q5TBC7 163 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 PRAMEF5Q5TYX0 476 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 OR52W1Q6IF63 320 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 C16orf89Q6UX73 402 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 ZNF600Q6ZNG1 722 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 PLEKHG7Q6ZR37 379 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 C8orf86Q6ZUL3 223 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 SLC25A26Q70HW3 274 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 OR2W3Q7Z3T1 314 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 TMEM179BQ7Z7N9 219 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 RTN4RL2Q86UN3 420 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 DHFR2Q86XF0 187 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 ZNF596Q8TC21 504 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 EMG1Q92979 244 aaKnown RBP5.85□□□□□ -1.47
CSDE1-206ENST00000483030 NOL4LQ96MY1 436 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-206ENST00000483030 DUX3Q96PT4 197 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 P2RX4Q99571 388 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 ASCL2Q99929 193 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 TVP23BQ9NYZ1 205 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 OR52A1Q9UKL2 312 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 LSM4Q9Y4Z0 139 aaKnown RBP5.85□□□□□ -1.47
CSDE1-206ENST00000483030 TMEM14AQ9Y6G1 99 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 R4GMQ9 66 aa5.85□□□□□ -1.47
CSDE1-206ENST00000483030 CCDC182A6NF36 153 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 DHRS7CA6NNS2 312 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 BUB1B-PAK6H3BSN5 160 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 M0QZK8 103 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 TOR1AO14656 332 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 MGST3O14880 152 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 ST8SIA5O15466 376 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 SNX3O60493 162 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 RAMP3O60896 148 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 RPP14O95059 124 aaKnown RBP5.84□□□□□ -1.47
CSDE1-206ENST00000483030 ZFPL1O95159 310 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 HTR3BO95264 441 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 CST1P01037 141 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 IGLV1-47P01700 117 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 SNRNP70P08621 437 aaKnown RBP5.84□□□□□ -1.47
CSDE1-206ENST00000483030 FAM106CPP0CH98 169 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 RAP2AP10114 183 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 PRKACGP22612 351 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 GDNFP39905 211 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 CEACAM3P40198 252 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 OR3A4PP47883 348 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 NPBWR2P48146 333 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 FUT6P51993 359 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 SNU13P55769 128 aaKnown RBP5.84□□□□□ -1.47
CSDE1-206ENST00000483030 P2RX3P56373 397 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 RAB25P57735 213 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 CXCR4P61073 352 aa5.84□□□□□ -1.47
CSDE1-206ENST00000483030 ACTR3P61158 418 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms