RNA–Protein interactions for RNA: ENST00000481804.5

CCDC78-211, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,248 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-211ENST00000481804 HPSE2Q8WWQ2 592 aa12.47□□□□□ -0.41
CCDC78-211ENST00000481804 SPSB1Q96BD6 273 aa12.47□□□□□ -0.41
CCDC78-211ENST00000481804 ZNF385AQ96PM9 386 aaKnown RBP12.47□□□□□ -0.41
CCDC78-211ENST00000481804 SLC25A31Q9H0C2 315 aa12.47□□□□□ -0.41
CCDC78-211ENST00000481804 IGHV1OR15-9A0A0B4J2B8 117 aa12.47□□□□□ -0.41
CCDC78-211ENST00000481804 GNRHRP30968 328 aa12.47□□□□□ -0.41
CCDC78-211ENST00000481804 ENDOGQ14249 297 aaKnown RBP12.47□□□□□ -0.41
CCDC78-211ENST00000481804 PHYHD1Q5SRE7 291 aa12.47□□□□□ -0.41
CCDC78-211ENST00000481804 OR10AD1Q8NGE0 317 aa12.47□□□□□ -0.41
CCDC78-211ENST00000481804 SPIN2AQ99865 258 aa12.47□□□□□ -0.41
CCDC78-211ENST00000481804 SPIN2BQ9BPZ2 258 aa12.47□□□□□ -0.41
CCDC78-211ENST00000481804 BCO1Q9HAY6 547 aa12.47□□□□□ -0.41
CCDC78-211ENST00000481804 DECR2Q9NUI1 292 aa12.47□□□□□ -0.41
CCDC78-211ENST00000481804 TGIF2-C20orf24A0A0A6YYL0 155 aa12.46□□□□□ -0.41
CCDC78-211ENST00000481804 C3orf85A0A1B0GTC6 90 aa12.46□□□□□ -0.41
CCDC78-211ENST00000481804 IGSF23A1L1A6 192 aa12.46□□□□□ -0.41
CCDC78-211ENST00000481804 ZNF587BE7ETH6 402 aa12.46□□□□□ -0.41
CCDC78-211ENST00000481804 IGLV3-19P01714 112 aa12.46□□□□□ -0.41
CCDC78-211ENST00000481804 RUNX1Q01196 453 aa12.46□□□□□ -0.41
CCDC78-211ENST00000481804 EIF3IQ13347 325 aaKnown RBP12.46□□□□□ -0.41
CCDC78-211ENST00000481804 NFAM1Q8NET5 270 aaPredicted RBP12.46□□□□□ -0.41
CCDC78-211ENST00000481804 TVP23CQ96ET8 276 aa12.46□□□□□ -0.41
CCDC78-211ENST00000481804 SMDT1Q9H4I9 107 aa12.46□□□□□ -0.41
CCDC78-211ENST00000481804 OPA3Q9H6K4 179 aa12.46□□□□□ -0.41
CCDC78-211ENST00000481804 COL6A3P12111 3177 aa12.46□□□□□ -0.42
CCDC78-211ENST00000481804 MSTNO14793 375 aa12.46□□□□□ -0.42
CCDC78-211ENST00000481804 JMJD7P0C870 316 aa12.46□□□□□ -0.42
CCDC78-211ENST00000481804 CTSSP25774 331 aa12.46□□□□□ -0.42
CCDC78-211ENST00000481804 CDPF1Q6NVV7 123 aa12.46□□□□□ -0.42
CCDC78-211ENST00000481804 C17orf82Q86X59 251 aaPredicted RBP12.46□□□□□ -0.42
CCDC78-211ENST00000481804 OSR2Q8N2R0 312 aa12.46□□□□□ -0.42
CCDC78-211ENST00000481804 PLEKHF2Q9H8W4 249 aa12.46□□□□□ -0.42
CCDC78-211ENST00000481804 PARPBPQ9NWS1 579 aa12.46□□□□□ -0.42
CCDC78-211ENST00000481804 KIAA1456Q9P272 454 aa12.46□□□□□ -0.42
CCDC78-211ENST00000481804 ATXN7O15265 892 aaPredicted RBP12.45□□□□□ -0.42
CCDC78-211ENST00000481804 CXCL1P09341 107 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 HIST3H3Q16695 136 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 C4orf17Q53FE4 359 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 SLC25A53Q5H9E4 307 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 CMTM1Q8IZ96 169 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 LRTM2Q8N967 370 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 CPNE4Q96A23 557 aaPredicted RBP12.45□□□□□ -0.42
CCDC78-211ENST00000481804 RHOVQ96L33 236 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 GPHA2Q96T91 129 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 GPR61Q9BZJ8 451 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 HSF4Q9ULV5 492 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 MUC3AQ02505 3323 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 BTBD17A6NE02 478 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 G3V3Y1 287 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 TRGC2P03986 189 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 SPNS3Q6ZMD2 512 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 MOB3AQ96BX8 217 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 UCN2Q96RP3 112 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 ANGPTL4Q9BY76 406 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 A0A1W2PR77 199 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 SEC14L6B5MCN3 397 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 MPPED1O15442 326 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 TNFSF12O43508 249 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 NRASP01111 189 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 KLK3P07288 261 aaPredicted RBP12.45□□□□□ -0.42
CCDC78-211ENST00000481804 DYNLT3P51808 116 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 SRPXP78539 464 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 ELOBQ15370 118 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 OR2T2Q6IF00 324 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 TMEM123Q8N131 208 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 TMEM252Q8N6L7 170 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 MTCH2Q9Y6C9 303 aa12.45□□□□□ -0.42
CCDC78-211ENST00000481804 DMDP11532 3685 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 ADAM20O43506 726 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 PPYP01298 95 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 SRP19P09132 144 aaKnown RBP12.44□□□□□ -0.42
CCDC78-211ENST00000481804 ERVFRD-1P60508 538 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 RAB11AP62491 216 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 CXorf66Q5JRM2 361 aaPredicted RBP12.44□□□□□ -0.42
CCDC78-211ENST00000481804 RHBDD2Q6NTF9 364 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 NEK7Q8TDX7 302 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 C10orf35Q96D05 121 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 SPACA9Q96E40 222 aaPredicted RBP12.44□□□□□ -0.42
CCDC78-211ENST00000481804 OR6C1Q96RD1 312 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 WDFY4Q6ZS81 3184 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 PITX3O75364 302 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 SCAF4O95104 1147 aaKnown RBP12.44□□□□□ -0.42
CCDC78-211ENST00000481804 CDS2O95674 445 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 FABP4P15090 132 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 TCN2P20062 427 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 PTGDSP41222 190 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 TLE4Q04727 773 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 ZNF774Q6NX45 483 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 DPPA2Q7Z7J5 298 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 MAML2Q8IZL2 1156 aaPredicted RBP12.44□□□□□ -0.42
CCDC78-211ENST00000481804 OR4D5Q8NGN0 318 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 RNASE11Q8TAA1 199 aaKnown RBP12.44□□□□□ -0.42
CCDC78-211ENST00000481804 PIGCQ92535 297 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 GNG13Q9P2W3 67 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 TRIOBPQ9H2D6 2365 aa12.44□□□□□ -0.42
CCDC78-211ENST00000481804 IGKV1-27A0A075B6S5 117 aa12.43□□□□□ -0.42
CCDC78-211ENST00000481804 ETV2O00321 342 aaPredicted RBP12.43□□□□□ -0.42
CCDC78-211ENST00000481804 TP53I11O14683 189 aa12.43□□□□□ -0.42
CCDC78-211ENST00000481804 HSD17B6O14756 317 aa12.43□□□□□ -0.42
CCDC78-211ENST00000481804 HIST1H2BKO60814 126 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms