RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 KIRREL2Q6UWL6 708 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 C20orf196Q8IYI0 205 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 OR52B4Q8NGK2 314 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 UBE2FQ969M7 185 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 GPR87Q9BY21 358 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 TMEM191AQ9H0A3 160 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 MMP25Q9NPA2 562 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 IGHV3-15A0A0B4J1V0 119 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 B4GALT3O60512 393 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 FAM87AP0C7U9 286 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 PAFAH1B2P68402 229 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 C12orf73Q69YU5 71 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 TAF1LQ8IZX4 1826 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 METTL12A8MUP2 240 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 SPRY1O43609 319 aaPredicted RBP8.51□□□□□ -1.05
VEGFA-212ENST00000480614 SEMA7AO75326 666 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 MRGPREQ86SM8 312 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 C21orf58P58505 322 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 PPP2CBP62714 309 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 PPP2CAP67775 309 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 CD300LDQ6UXZ3 194 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 C1orf174Q8IYL3 243 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 TM4SF19Q96DZ7 209 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 ISG20L2Q9H9L3 353 aaKnown RBP8.51□□□□□ -1.05
VEGFA-212ENST00000480614 TRILQ7L0X0 811 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 GFERP55789 205 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 MLF1P58340 268 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 FNDC7Q5VTL7 733 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 MAP1LC3CQ9BXW4 147 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 WASHC3Q9Y3C0 194 aa8.51□□□□□ -1.05
VEGFA-212ENST00000480614 ISLRO14498 428 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 LPAR6P43657 344 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 OR3A1P47881 315 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 ZNF83P51522 516 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 DHRS2Q13268 280 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 OLIG3Q7RTU3 272 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 OR1B1Q8NGR6 318 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 OR6X1Q8NH79 312 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 GPBAR1Q8TDU6 330 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 FAM210BQ96KR6 192 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 WDFY2Q96P53 400 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 NEURL2Q9BR09 285 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 TCFL5Q9UL49 500 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 OOEPA6NGQ2 149 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 CEACAM5P06731 702 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 ALKBH6Q3KRA9 238 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 ARHGAP5-AS1Q96IT6 56 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 ZNF768Q9H5H4 540 aaKnown RBP8.5□□□□□ -1.05
VEGFA-212ENST00000480614 PSG11Q9UQ72 335 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 SPTY2D1-AS1A0A0U1RR47 76 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 SMIM12Q96EX1 92 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 HSD17B10Q99714 261 aaKnown RBP8.5□□□□□ -1.05
VEGFA-212ENST00000480614 SLC6A1P30531 599 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 UBE2L3P68036 154 aaKnown RBP8.5□□□□□ -1.05
VEGFA-212ENST00000480614 MRM1Q6IN84 353 aaKnown RBP8.5□□□□□ -1.05
VEGFA-212ENST00000480614 DEFB123Q8N688 67 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 ERRFI1Q9UJM3 462 aaPredicted RBP8.5□□□□□ -1.05
VEGFA-212ENST00000480614 ID1P41134 155 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 ZNF273Q14593 569 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 LRRC61Q9BV99 259 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 ZFP64Q9NPA5 681 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 EML6Q6ZMW3 1958 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 LYZP61626 148 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 ANKRD55Q3KP44 614 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 CCDC144NLQ6NUI1 221 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 DPPA3Q6W0C5 159 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 PLXND1Q9Y4D7 1925 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 CXCL10P02778 98 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 PPOXP50336 477 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 LINC00303Q3SY05 128 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 CCDC190Q86UF4 302 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 TUSC5Q8IXB3 177 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 KTI12Q96EK9 354 aaPredicted RBP8.5□□□□□ -1.05
VEGFA-212ENST00000480614 Q9N2K0 584 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 NAT8Q9UHE5 227 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 GYPAP02724 150 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 HLA-BQ31612 363 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 OR2T10Q8NGZ9 312 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 VN1R1Q9GZP7 353 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 AP5S1Q9NUS5 200 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 PLPP2O43688 288 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 INHBBP09529 407 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 ZNF275Q9NSD4 429 aaPredicted RBP8.5□□□□□ -1.05
VEGFA-212ENST00000480614 KCNMB2Q9Y691 235 aa8.5□□□□□ -1.05
VEGFA-212ENST00000480614 FCMRO60667 390 aa8.49□□□□□ -1.05
VEGFA-212ENST00000480614 B3GALT4O96024 378 aa8.49□□□□□ -1.05
VEGFA-212ENST00000480614 C1QTNF12Q5T7M4 302 aa8.49□□□□□ -1.05
VEGFA-212ENST00000480614 RELL2Q8NC24 303 aaPredicted RBP8.49□□□□□ -1.05
VEGFA-212ENST00000480614 DUSP18Q8NEJ0 188 aa8.49□□□□□ -1.05
VEGFA-212ENST00000480614 NUBPLQ8TB37 319 aa8.49□□□□□ -1.05
VEGFA-212ENST00000480614 DERL3Q96Q80 235 aa8.49□□□□□ -1.05
VEGFA-212ENST00000480614 MYO9AB2RTY4 2548 aa8.49□□□□□ -1.05
VEGFA-212ENST00000480614 HAND1O96004 215 aa8.49□□□□□ -1.05
VEGFA-212ENST00000480614 SLC25A40Q8TBP6 338 aa8.49□□□□□ -1.05
VEGFA-212ENST00000480614 SPOCK3Q9BQ16 436 aa8.49□□□□□ -1.05
VEGFA-212ENST00000480614 TINAGL1Q9GZM7 467 aaPredicted RBP8.49□□□□□ -1.05
VEGFA-212ENST00000480614 RNF167Q9H6Y7 350 aa8.49□□□□□ -1.05
VEGFA-212ENST00000480614 FLVCR2Q9UPI3 526 aa8.49□□□□□ -1.05
VEGFA-212ENST00000480614 A0A1B0GTQ1 180 aa8.49□□□□□ -1.05
VEGFA-212ENST00000480614 SIRT3Q9NTG7 399 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms