RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 KDM4BO94953 1096 aa12.47□□□□□ -0.41
CDK9-203ENST00000480353 DCKP27707 260 aa12.47□□□□□ -0.41
CDK9-203ENST00000480353 SOX2P48431 317 aa12.47□□□□□ -0.41
CDK9-203ENST00000480353 SRSF4Q08170 494 aaKnown RBP12.47□□□□□ -0.41
CDK9-203ENST00000480353 KISS1Q15726 138 aa12.47□□□□□ -0.41
CDK9-203ENST00000480353 AANATQ16613 207 aa12.47□□□□□ -0.41
CDK9-203ENST00000480353 ARSJQ5FYB0 599 aaPredicted RBP12.47□□□□□ -0.41
CDK9-203ENST00000480353 RPL22L1Q6P5R6 122 aaKnown RBP12.47□□□□□ -0.41
CDK9-203ENST00000480353 SAXO1Q8IYX7 474 aa12.47□□□□□ -0.41
CDK9-203ENST00000480353 DHRSXQ8N5I4 330 aa12.47□□□□□ -0.41
CDK9-203ENST00000480353 OR4S1Q8NGB4 309 aa12.47□□□□□ -0.41
CDK9-203ENST00000480353 OR52N4Q8NGI2 321 aa12.47□□□□□ -0.41
CDK9-203ENST00000480353 NDNFQ8TB73 568 aa12.47□□□□□ -0.41
CDK9-203ENST00000480353 CNIH3Q8TBE1 160 aa12.47□□□□□ -0.41
CDK9-203ENST00000480353 APH1BQ8WW43 257 aa12.47□□□□□ -0.41
CDK9-203ENST00000480353 NKX3-1Q99801 234 aaPredicted RBP12.47□□□□□ -0.41
CDK9-203ENST00000480353 SEBOXQ9HB31 216 aaPredicted RBP12.47□□□□□ -0.41
CDK9-203ENST00000480353 MRPS18AQ9NVS2 196 aaKnown RBP12.47□□□□□ -0.41
CDK9-203ENST00000480353 ING3Q9NXR8 418 aa12.47□□□□□ -0.41
CDK9-203ENST00000480353 SESN1Q9Y6P5 492 aa12.47□□□□□ -0.41
CDK9-203ENST00000480353 E9PI62 339 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 DEGS1O15121 323 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 PSPNO60542 156 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 CLPXO76031 633 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 OR2H2O95918 312 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 PAX6P26367 422 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 P2RX3P56373 397 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 PPP3R1P63098 170 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 RCN1Q15293 331 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 SMN1Q16637 294 aaKnown RBP12.46□□□□□ -0.41
CDK9-203ENST00000480353 CCDC58Q4VC31 144 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 ZNF691Q5VV52 312 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 SLC35E4Q6ICL7 350 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 LIAT1Q6ZQX7 453 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 LHFPL4Q7Z7J7 247 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 C11orf42Q8N5U0 333 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 PARP16Q8N5Y8 322 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 CHST4Q8NCG5 386 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 OR2T6Q8NHC8 308 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 RPS4Y2Q8TD47 263 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 GPR148Q8TDV2 347 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 MALSU1Q96EH3 234 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 NR1H4Q96RI1 486 aaPredicted RBP12.46□□□□□ -0.41
CDK9-203ENST00000480353 S100A13Q99584 98 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 CITED1Q99966 193 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 NPFFR1Q9GZQ6 430 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 VCXQ9H320 206 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 C16orf95Q9H693 158 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 FGF20Q9NP95 211 aaPredicted RBP12.46□□□□□ -0.41
CDK9-203ENST00000480353 PITPNC1Q9UKF7 332 aa12.46□□□□□ -0.41
CDK9-203ENST00000480353 UBE2J1Q9Y385 318 aaPredicted RBP12.46□□□□□ -0.41
CDK9-203ENST00000480353 EXOSC1Q9Y3B2 195 aaKnown RBP12.46□□□□□ -0.41
CDK9-203ENST00000480353 TSPAN9O75954 239 aa12.45□□□□□ -0.42
CDK9-203ENST00000480353 ALX3O95076 343 aa12.45□□□□□ -0.42
CDK9-203ENST00000480353 CLIC3O95833 236 aa12.45□□□□□ -0.42
CDK9-203ENST00000480353 ERP29P30040 261 aaKnown RBP12.45□□□□□ -0.42
CDK9-203ENST00000480353 OR3A1P47881 315 aa12.45□□□□□ -0.42
CDK9-203ENST00000480353 GTF2A1P52655 376 aaPredicted RBP12.45□□□□□ -0.42
CDK9-203ENST00000480353 DLX6P56179 175 aa12.45□□□□□ -0.42
CDK9-203ENST00000480353 RSU1Q15404 277 aa12.45□□□□□ -0.42
CDK9-203ENST00000480353 SSX2Q16385 188 aa12.45□□□□□ -0.42
CDK9-203ENST00000480353 OR52W1Q6IF63 320 aa12.45□□□□□ -0.42
CDK9-203ENST00000480353 PACRGLQ8N7B6 248 aa12.45□□□□□ -0.42
CDK9-203ENST00000480353 TNFAIP8L1Q8WVP5 186 aa12.45□□□□□ -0.42
CDK9-203ENST00000480353 CLEC7AQ9BXN2 247 aa12.45□□□□□ -0.42
CDK9-203ENST00000480353 IGKV1-12A0A0C4DH73 117 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 F2RL2O00254 374 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 PEX14O75381 377 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 WBP4O75554 376 aaKnown RBP12.44□□□□□ -0.42
CDK9-203ENST00000480353 IGKV1D-12P01611 117 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 LIMS3P0CW19 117 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 LIMS4P0CW20 117 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 MTNR1BP49286 362 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 ETV1P50549 477 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 ARHGDIBP52566 201 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 PROK1P58294 105 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 SLC34A1Q06495 639 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 AESQ08117 197 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 IL18R1Q13478 541 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 CDK5R1Q15078 307 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 KRBOX4Q5JUW0 171 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 OR2G6Q5TZ20 316 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 ZNF626Q68DY1 528 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 ASPHD2Q6ICH7 369 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 Q6ZTK2 550 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 OR11H6Q8NGC7 330 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 OR4D6Q8NGJ1 314 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 TMEM80Q96HE8 168 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 JAM3Q9BX67 310 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 TMEM133Q9H2Q1 129 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 TAS2R4Q9NYW5 299 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 CKLFQ9UBR5 152 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 HILPDAQ9Y5L2 63 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 KIAA2026Q5HYC2 2103 aa12.44□□□□□ -0.42
CDK9-203ENST00000480353 IGHV2-26A0A0B4J1V2 119 aa12.43□□□□□ -0.42
CDK9-203ENST00000480353 HSPB6O14558 160 aa12.43□□□□□ -0.42
CDK9-203ENST00000480353 TOR1AO14656 332 aa12.43□□□□□ -0.42
CDK9-203ENST00000480353 CSTBP04080 98 aaKnown RBP12.43□□□□□ -0.42
CDK9-203ENST00000480353 PTGFRP43088 359 aa12.43□□□□□ -0.42
CDK9-203ENST00000480353 ATXN7L3Q14CW9 347 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms