RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 RPS27AP62979 156 aaKnown RBP9.33□□□□□ -0.92
CLDN11-205ENST00000480067 COL10A1Q03692 680 aa9.33□□□□□ -0.92
CLDN11-205ENST00000480067 FAM189A2Q15884 450 aa9.33□□□□□ -0.92
CLDN11-205ENST00000480067 MPV17LQ2QL34 196 aa9.33□□□□□ -0.92
CLDN11-205ENST00000480067 ESCO2Q56NI9 601 aa9.33□□□□□ -0.92
CLDN11-205ENST00000480067 LRRC10Q5BKY1 277 aa9.33□□□□□ -0.92
CLDN11-205ENST00000480067 FAM216BQ8N7L0 139 aa9.33□□□□□ -0.92
CLDN11-205ENST00000480067 ASCC1Q8N9N2 400 aaKnown RBP9.33□□□□□ -0.92
CLDN11-205ENST00000480067 CHST4Q8NCG5 386 aa9.33□□□□□ -0.92
CLDN11-205ENST00000480067 MAPK1IP1LQ8NDC0 245 aa9.33□□□□□ -0.92
CLDN11-205ENST00000480067 AP3S1Q92572 193 aa9.33□□□□□ -0.92
CLDN11-205ENST00000480067 PTX4Q96A99 478 aa9.33□□□□□ -0.92
CLDN11-205ENST00000480067 KCTD12Q96CX2 325 aaKnown RBP9.33□□□□□ -0.92
CLDN11-205ENST00000480067 POM121Q96HA1 1249 aa9.33□□□□□ -0.92
CLDN11-205ENST00000480067 GAFA1Q96PS6 74 aa9.33□□□□□ -0.92
CLDN11-205ENST00000480067 BATF3Q9NR55 127 aa9.33□□□□□ -0.92
CLDN11-205ENST00000480067 CLN8Q9UBY8 286 aa9.33□□□□□ -0.92
CLDN11-205ENST00000480067 MAB21L2Q9Y586 359 aa9.33□□□□□ -0.92
CLDN11-205ENST00000480067 ZANQ9Y493 2812 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 MAST4O15021 2626 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 METTL21EPA6NDL7 271 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 H7C1Q1 480 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 SIRPB1O00241 398 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 LDLRAD4O15165 306 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 RAB6AP20340 208 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 IL2RGP31785 369 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 NPY4RP50391 375 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 GNB2P62879 340 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 ATAD3CQ5T2N8 411 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 Q6P435 159 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 METAP1DQ6UB28 335 aaPredicted RBP9.32□□□□□ -0.92
CLDN11-205ENST00000480067 TMEM185AQ8NFB2 350 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 PPP1R35Q8TAP8 253 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 LGALS14Q8TCE9 139 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 DYNC2LI1Q8TCX1 351 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 ACOT12Q8WYK0 555 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 Q96M66 194 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 SPACA1Q9HBV2 294 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 CTSZQ9UBR2 303 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 SLC25A10Q9UBX3 287 aaPredicted RBP9.32□□□□□ -0.92
CLDN11-205ENST00000480067 ETV7Q9Y603 341 aa9.32□□□□□ -0.92
CLDN11-205ENST00000480067 ZNF469Q96JG9 3925 aaPredicted RBP9.32□□□□□ -0.92
CLDN11-205ENST00000480067 FLNAP21333 2647 aaKnown RBP9.31□□□□□ -0.92
CLDN11-205ENST00000480067 A0A096LNT2 108 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 A0A1B0GW55 424 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 FAM90A10PA6NDY2 464 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 FAM90A18PA6NE21 464 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 FAM90A16PA6NEW6 464 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 FAM90A20PA6NIJ5 464 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 FAM90A8PA6NJQ4 464 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 FAM90A7PA6NKC0 464 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 FAM90A22PA8MWA6 464 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 FAM90A12PA8MX19 464 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 FAM90A5PA8MXJ8 464 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 FAM90A23PA8MXZ1 464 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 F5H0A9 414 aaPredicted RBP9.31□□□□□ -0.92
CLDN11-205ENST00000480067 K7N7A8 449 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 HSPB6O14558 160 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 SMAD7O15105 426 aaKnown RBP9.31□□□□□ -0.92
CLDN11-205ENST00000480067 PHF1O43189 567 aaPredicted RBP9.31□□□□□ -0.92
CLDN11-205ENST00000480067 TK1P04183 234 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 FAM90A15PP0C7V4 464 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 FAM90A13PP0C7W8 464 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 FAM90A14PP0C7W9 464 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 FAM90A24PP0C7X0 464 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 DUX4L2P0CJ85 424 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 DUX4L3P0CJ86 424 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 DUX4L4P0CJ87 422 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 DUX4L5P0CJ88 424 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 DUX4L6P0CJ89 424 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 DUX4L7P0CJ90 424 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 NDUFB7P17568 137 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 LMO1P25800 156 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 EFNB2P52799 333 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 MZT2AQ6P582 158 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 DUX4L9Q6RFH8 374 aaPredicted RBP9.31□□□□□ -0.92
CLDN11-205ENST00000480067 SPNS3Q6ZMD2 512 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 ZNF841Q6ZN19 808 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 CIARTQ8N365 385 aaPredicted RBP9.31□□□□□ -0.92
CLDN11-205ENST00000480067 OR5D13Q8NGL4 314 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 ST8SIA4Q92187 359 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 SNX22Q96L94 193 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 SSBP3Q9BWW4 388 aaPredicted RBP9.31□□□□□ -0.92
CLDN11-205ENST00000480067 TM2D1Q9BX74 207 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 FAM234AQ9H0X4 552 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 LPAR5Q9H1C0 372 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 ATG5Q9H1Y0 275 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 IFT22Q9H7X7 185 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 COMMD3Q9UBI1 195 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 DUX4Q9UBX2 424 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 SPATA2Q9UM82 520 aa9.31□□□□□ -0.92
CLDN11-205ENST00000480067 TRAV24A0A0B4J272 114 aa9.3□□□□□ -0.92
CLDN11-205ENST00000480067 A6NHS1 94 aa9.3□□□□□ -0.92
CLDN11-205ENST00000480067 SLC33A1O00400 549 aaPredicted RBP9.3□□□□□ -0.92
CLDN11-205ENST00000480067 GPR37O15354 613 aa9.3□□□□□ -0.92
CLDN11-205ENST00000480067 PSPNO60542 156 aa9.3□□□□□ -0.92
CLDN11-205ENST00000480067 ZNF737O75373 536 aa9.3□□□□□ -0.92
CLDN11-205ENST00000480067 SELLP14151 372 aa9.3□□□□□ -0.92
CLDN11-205ENST00000480067 FUT3P21217 361 aa9.3□□□□□ -0.92
CLDN11-205ENST00000480067 BLVRBP30043 206 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms