RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 GPX5O75715 221 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 RPP14O95059 124 aaKnown RBP5.27□□□□□ -1.57
SF3B1-209ENST00000479532 NMBP08949 121 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 ACAA1P09110 424 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-209ENST00000479532 SULT1A3P0DMM9 295 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 SULT1A4P0DMN0 295 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 OTX1P32242 354 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-209ENST00000479532 RPL35P42766 123 aaKnown RBP5.27□□□□□ -1.57
SF3B1-209ENST00000479532 TAS2R43P59537 309 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 RAB5BP61020 215 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 DEFA6Q01524 100 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 ZNF85Q03923 595 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 COTL1Q14019 142 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 EFNB3Q15768 340 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 ADIPOQQ15848 244 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 TP53I3Q53FA7 332 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 KRBOX4Q5JUW0 171 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 SPATA46Q5T0L3 261 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 C10orf91Q5T1B1 145 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 AVPI1Q5T686 147 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 PAMR1Q6UXH9 720 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 MRPL52Q86TS9 123 aaKnown RBP5.27□□□□□ -1.57
SF3B1-209ENST00000479532 ZNF101Q8IZC7 436 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 SYS1Q8N2H4 156 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 CCDC54Q8NEL0 328 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 KLF14Q8TD94 323 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-209ENST00000479532 SPRYD4Q8WW59 207 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-209ENST00000479532 ACOT12Q8WYK0 555 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 GGHQ92820 318 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 CMBLQ96DG6 245 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 PHYHIPLQ96FC7 376 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 REEP6Q96HR9 211 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 C4orf36Q96KX1 117 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 AMELYQ99218 206 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 GPR61Q9BZJ8 451 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 OR2J1Q9GZK6 312 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 PBOV1Q9GZY1 135 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 COMMD4Q9H0A8 199 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 PLEKHF2Q9H8W4 249 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 TAAR3PQ9P1P4 343 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 MRM2Q9UI43 246 aaKnown RBP5.27□□□□□ -1.57
SF3B1-209ENST00000479532 SSR3Q9UNL2 185 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 LAMP3Q9UQV4 416 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 PLEKHA6Q9Y2H5 1048 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 STARD10Q9Y365 291 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 FASNP49327 2511 aaKnown RBP5.27□□□□□ -1.57
SF3B1-209ENST00000479532 LRRK2Q5S007 2527 aa5.27□□□□□ -1.57
SF3B1-209ENST00000479532 RAI1Q7Z5J4 1906 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-209ENST00000479532 PKDREJQ9NTG1 2253 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 A0A0U1RQV5 110 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 TMEM129A0AVI4 362 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 FABP12A6NFH5 140 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 C5orf52A6NGY3 159 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 ANKRD30BLA7E2S9 258 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 MPC2O95563 127 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 NGFP01138 241 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 IGHV3-13P01766 116 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 UBCP0CG48 685 aaKnown RBP5.26□□□□□ -1.57
SF3B1-209ENST00000479532 PAX1P15863 534 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 PVALBP20472 110 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-209ENST00000479532 KITLGP21583 273 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 PSMA1P25786 263 aaKnown RBP5.26□□□□□ -1.57
SF3B1-209ENST00000479532 MAP2K4P45985 399 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 PPOXP50336 477 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 WNT4P56705 351 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 OR12D2P58182 307 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 ERVS71-1P61550 626 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 LSM3P62310 102 aaKnown RBP5.26□□□□□ -1.57
SF3B1-209ENST00000479532 MZT1Q08AG7 82 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 ZMYND11Q15326 602 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 SSX2Q16385 188 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 SNAI3Q3KNW1 292 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 LGALSLQ3ZCW2 172 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-209ENST00000479532 PLA1AQ53H76 456 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 SAPCD1Q5SSQ6 148 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 GLYATL3Q5SZD4 288 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 TMEM244Q5VVB8 128 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 LIPNQ5VXI9 398 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 FBXW12Q6X9E4 464 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 Q6ZRM9 215 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 COLCA1Q6ZS62 124 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 SSX9Q7RTT3 188 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 SSX6Q7RTT6 188 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 DTX2Q86UW9 622 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 PDZD9Q8IXQ8 264 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 SPICQ8N5J4 248 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 RFLNBQ8N5W9 214 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 ZNF676Q8N7Q3 588 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 CSNK2A3Q8NEV1 391 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 OR8B12Q8NGG6 310 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 UPRTQ96BW1 309 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 HAVCR1Q96D42 359 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 LURAP1Q96LR2 239 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 ZNF747Q9BV97 191 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 MRPL37Q9BZE1 423 aaKnown RBP5.26□□□□□ -1.57
SF3B1-209ENST00000479532 RAB1BQ9H0U4 201 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 METTL9Q9H1A3 318 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 MMP28Q9H239 520 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 PPP1R3EQ9H7J1 279 aa5.26□□□□□ -1.57
SF3B1-209ENST00000479532 PLEKHA1Q9HB21 404 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms