RNA–Protein interactions for RNA: ENST00000478840.1

UPF3B-203, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3B, Length 748 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-203ENST00000478840 TPM3P06753 285 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 OCMP0CE72 109 aaPredicted RBP3.03□□□□□ -1.92
UPF3B-203ENST00000478840 RD3LP0DJH9 198 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 SLC2A1P11166 492 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 M6PRP20645 277 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 ACOT2P49753 483 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 UBE2G2P60604 165 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 TPM4P67936 248 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 HBG1P69891 147 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 HBG2P69892 147 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 PRDX1Q06830 199 aaKnown RBP3.03□□□□□ -1.92
UPF3B-203ENST00000478840 COTL1Q14019 142 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 ELOCQ15369 112 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 NIPAL1Q6NVV3 410 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 ITPRIPQ8IWB1 547 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 STK40Q8N2I9 435 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 OSR2Q8N2R0 312 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 TMEM105Q8N8V8 129 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 OR8A1Q8NGG7 326 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 PPWD1Q96BP3 646 aaKnown RBP3.03□□□□□ -1.92
UPF3B-203ENST00000478840 DDIT4LQ96D03 193 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 FAM210AQ96ND0 272 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 DERL3Q96Q80 235 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 IL37Q9NZH6 218 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 VWA8A3KMH1 1905 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 ARID1AO14497 2285 aa3.03□□□□□ -1.92
UPF3B-203ENST00000478840 KIAA1671Q9BY89 1806 aa3.03□□□□□ -1.93
UPF3B-203ENST00000478840 IGKV2-28A0A075B6P5 120 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 LRCOL1A6NCL2 159 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 FABP12A6NFH5 140 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 I3L4J1 428 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 J3QLI3 93 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 AQP9O43315 295 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 COX7A2P2O60397 106 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 CNMDO75829 334 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 IGKV2D-28P01615 120 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 IL4P05112 153 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 CD28P10747 220 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 ELK4P28324 431 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 IMPA1P29218 277 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 PLEKHG7Q6ZR37 379 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 GALNT10Q86SR1 603 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 LINC00596Q86U02 117 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 MIR7-3HGQ8N6C7 128 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 ZDHHC22Q8N966 263 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 YIPF6Q96EC8 236 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 YPEL4Q96NS1 127 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 THTPAQ9BU02 230 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 ZNF717Q9BY31 904 aaPredicted RBP3.02□□□□□ -1.93
UPF3B-203ENST00000478840 DHX35Q9H5Z1 703 aaKnown RBP3.02□□□□□ -1.93
UPF3B-203ENST00000478840 LINC00574Q9H8X3 128 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 IMP3Q9NV31 184 aaKnown RBP3.02□□□□□ -1.93
UPF3B-203ENST00000478840 TAS2R13Q9NYV9 303 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 TAC3Q9UHF0 121 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 ATP6V1DQ9Y5K8 247 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 DYSFO75923 2080 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 PCM1Q15154 2024 aa3.02□□□□□ -1.93
UPF3B-203ENST00000478840 LOXHD1Q8IVV2 1947 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 IGLV3-12A0A075B6K2 115 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 TMEM150BA6NC51 233 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 FAM183AA6NL82 134 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 C9J4A7 227 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 MPZL2O60487 215 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 RAB36O95755 333 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 SEC11BP0C7V7 166 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 PRTN3P24158 256 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 MPV17P39210 176 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 LINC00315P59091 139 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 RAB8AP61006 207 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 RHOAP61586 193 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 ZNHIT3Q15649 155 aaPredicted RBP3.01□□□□□ -1.93
UPF3B-203ENST00000478840 UBE2NLQ5JXB2 153 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 APCDD1LQ8NCL9 501 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 OR6K3Q8NGY3 331 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 PGLYRP3Q96LB9 341 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 FAAP24Q9BTP7 215 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 UPF3BQ9BZI7 483 aaKnown RBP3.01□□□□□ -1.93
UPF3B-203ENST00000478840 RWDD2AQ9UIY3 292 aa3.01□□□□□ -1.93
UPF3B-203ENST00000478840 MYO15BQ96JP2 1530 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 TRAV8-3A0A0A6YYJ7 113 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 TRAV40A0A0B4J280 105 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 C1orf232A0A0U1RR37 186 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 GMNCA6NCL1 334 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 GOLGA6L10A6NI86 522 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 COLCA2A8K830 154 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 K7EPK0 472 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 PHYHO14832 338 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 FGF16O43320 207 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 ENTPD6O75354 484 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 IGHV1-46P01743 117 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 CD40LGP29965 261 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 EMP2P54851 167 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 FUT5Q11128 374 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 MOBPQ13875 183 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 TMEM215Q68D42 235 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 MED27Q6P2C8 311 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 ZNF773Q6PK81 442 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 DGAT2L6Q6ZPD8 337 aa3□□□□□ -1.93
UPF3B-203ENST00000478840 H1FOOQ8IZA3 346 aaPredicted RBP3□□□□□ -1.93
UPF3B-203ENST00000478840 FAM9CQ8IZT9 166 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms