RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TNFSF13O75888 250 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 TSPAN13O95857 204 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 OTCP00480 354 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 SNRPAP09012 282 aaKnown RBP2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 GIPP09681 153 aaPredicted RBP2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 CSF3P09919 207 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 IGKV1-13P0DP09 117 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 NR2C1P13056 603 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 MGMTP16455 207 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 RCC1P18754 421 aaPredicted RBP2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 TAC1P20366 129 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 HIST1H1TP22492 207 aaPredicted RBP2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 UQCRFS1P47985 274 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 SSR4P51571 173 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 RAP1GDS1P52306 607 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 FGF8P55075 233 aaPredicted RBP2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 MLF1P58340 268 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 MAGOHP61326 146 aaKnown RBP2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 NCALDP61601 193 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 PSPHP78330 225 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 RCN1Q15293 331 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 MPPED2Q15777 294 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 SGCAQ16586 387 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 SPANXN2Q5MJ10 180 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 KHDRBS2Q5VWX1 349 aaKnown RBP2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 AP1ARQ63HQ0 302 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 CNIH2Q6PI25 160 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 TIFABQ6ZNK6 161 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 PAGE2Q7Z2X7 111 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 CAMK2N1Q7Z7J9 78 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 PRSS58Q8IYP2 241 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 ST13P4Q8IZP2 240 aaPredicted RBP2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 RNF175Q8N4F7 328 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 APCDD1LQ8NCL9 501 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 OR5T3Q8NGG3 340 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 OR1S2Q8NGQ3 325 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 NUBPLQ8TB37 319 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 PHF10Q8WUB8 498 aaKnown RBP2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 IFT81Q8WYA0 676 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 RDH5Q92781 318 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 TMEM54Q969K7 222 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 MCUR1Q96AQ8 359 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 SGK3Q96BR1 496 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 LRRC58Q96CX6 371 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 CCDC126Q96EE4 140 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 L3HYPDHQ96EM0 354 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF382Q96SR6 550 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 SERPINI1Q99574 410 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 ATP5SQ99766 215 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 ECSITQ9BQ95 431 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 MRPL57Q9BQC6 102 aaKnown RBP2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 UTP23Q9BRU9 249 aaKnown RBP2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 SIKE1Q9BRV8 207 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF717Q9BY31 904 aaPredicted RBP2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 TMEM185BQ9H7F4 350 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 ASF1BQ9NVP2 202 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 PCTPQ9UKL6 214 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 USH1CQ9Y6N9 552 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 MED12Q93074 2177 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 MED13LQ71F56 2210 aa2.65□□□□□ -1.99
CDC42BPA-212ENST00000478573 FREM1Q5H8C1 2179 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 FLNBO75369 2602 aaKnown RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 UNC79Q9P2D8 2635 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 HECTD1Q9ULT8 2610 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 ANKHD1Q8IWZ3 2542 aaKnown RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 TRAV39A0A0B4J263 110 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 A0A0B4J2A0 478 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 A0A1B0GVI7 797 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 NKX2-6A6NCS4 301 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 CLOCKO15516 846 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 CTNSO60931 367 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 EEDO75530 441 aaKnown RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 PIAS1O75925 651 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 MYO1DO94832 1006 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 OR2F2O95006 317 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 STATHP02808 62 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 IGKV3-11P04433 115 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF24P17028 368 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 GALP22466 123 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 CPN2P22792 545 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 HMOX2P30519 316 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 NAA10P41227 235 aaPredicted RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 CA7P43166 264 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 CYB561P49447 251 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 TMED10P49755 219 aaKnown RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 PRRX1P54821 245 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 RAB8AP61006 207 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 BTN3A2P78410 334 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 UNC119Q13432 240 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 EBPQ15125 230 aaKnown RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 IGFBP7Q16270 282 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 C18orf21Q32NC0 220 aaPredicted RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 RFX4Q33E94 735 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 CCDC153Q494R4 210 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 SPIN4Q56A73 249 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 COA6Q5JTJ3 125 aaKnown RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF678Q5SXM1 525 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 ADNP2Q6IQ32 1131 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 SLC25A25Q6KCM7 469 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 OPN5Q6U736 354 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms