RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 PRIMA1Q86XR5 153 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 PDZD9Q8IXQ8 264 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 SAXO1Q8IYX7 474 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 SPARTQ8N0X7 666 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 TEX29Q8N6K0 151 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 ZSCAN4Q8NAM6 433 aaPredicted RBP5.69□□□□□ -1.5
BRCA1-215ENST00000478531 MUL1Q969V5 352 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 YTHDF1Q9BYJ9 559 aaKnown RBP5.69□□□□□ -1.5
BRCA1-215ENST00000478531 HMG20AQ9NP66 347 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 EXOSC4Q9NPD3 245 aaKnown RBP5.69□□□□□ -1.5
BRCA1-215ENST00000478531 ISYNA1Q9NPH2 558 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 C19orf12Q9NSK7 152 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 GLS2Q9UI32 602 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 FOXJ3Q9UPW0 622 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 K7N7A8 449 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 SH2D1BO14796 132 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 MRPS14O60783 128 aaKnown RBP5.69□□□□□ -1.5
BRCA1-215ENST00000478531 OR2H2O95918 312 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 IFNA2P01563 188 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 CSTBP04080 98 aaKnown RBP5.69□□□□□ -1.5
BRCA1-215ENST00000478531 LIPFP07098 398 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 GABRA5P31644 462 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 GP2P55259 537 aaKnown RBP5.69□□□□□ -1.5
BRCA1-215ENST00000478531 DLX1P56177 255 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 RPL31P62899 125 aaKnown RBP5.69□□□□□ -1.5
BRCA1-215ENST00000478531 SRSF2Q01130 221 aaKnown RBP5.69□□□□□ -1.5
BRCA1-215ENST00000478531 FABP5Q01469 135 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 SCGB2A2Q13296 93 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 ZNF146Q15072 292 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 TRAM1Q15629 374 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 GRK1Q15835 563 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 NEDD8Q15843 81 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 SSX1Q16384 188 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 KCTD21Q4G0X4 260 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 SLC22A6Q4U2R8 563 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 CFAP161Q6P656 301 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 BRD3OSQ6XYD6 125 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 TMEM91Q6ZNR0 172 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 GDPD3Q7L5L3 318 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 VMO1Q7Z5L0 202 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 OR8H2Q8N162 312 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 TPRX1Q8N7U7 411 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 NKAIN3Q8N8D7 197 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 PXT1Q8NFP0 134 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 GIMAP1Q8WWP7 306 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 WDFY2Q96P53 400 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 SLC6A7Q99884 636 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 SLITRK2Q9H156 845 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 METTL9Q9H1A3 318 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 PPIL3Q9H2H8 161 aaKnown RBP5.69□□□□□ -1.5
BRCA1-215ENST00000478531 CNTD2Q9H8S5 307 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 SIRT7Q9NRC8 400 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 NDUFB11Q9NX14 153 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 ING3Q9NXR8 418 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 MRPS28Q9Y2Q9 187 aaKnown RBP5.69□□□□□ -1.5
BRCA1-215ENST00000478531 LRRC42Q9Y546 428 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 ANK2Q01484 3957 aa5.69□□□□□ -1.5
BRCA1-215ENST00000478531 TRBV23-1A0A0A0MS06 115 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 A0A1W2PP11 408 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 TMEM82A0PJX8 343 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 PSPNO60542 156 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 ZNF737O75373 536 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 GPX5O75715 221 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 SC5DO75845 299 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 UCHL1P09936 223 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 SRMP19623 302 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 PSMA1P25786 263 aaKnown RBP5.68□□□□□ -1.5
BRCA1-215ENST00000478531 MTNR1BP49286 362 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 ATXN7L3Q14CW9 347 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-215ENST00000478531 KLF17Q5JT82 389 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-215ENST00000478531 GPR157Q5UAW9 335 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 UBE2UQ5VVX9 321 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 RUSC1-AS1Q66K80 236 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 GLIPR1L1Q6UWM5 242 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 UNQ9370/PRO34162Q6UXP9 181 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 C17orf107Q6ZR85 190 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 CMTM4Q8IZR5 234 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 BPIFB2Q8N4F0 458 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 OR4D6Q8NGJ1 314 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 FCGR1BQ92637 280 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 LHX4Q969G2 390 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 UPRTQ96BW1 309 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 FAM234AQ9H0X4 552 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 SIRPDQ9H106 197 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 PPA2Q9H2U2 334 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 RHOFQ9HBH0 211 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 ST3GAL6Q9Y274 331 aa5.68□□□□□ -1.5
BRCA1-215ENST00000478531 SF3B6Q9Y3B4 125 aaKnown RBP5.68□□□□□ -1.5
BRCA1-215ENST00000478531 BOLA2-SMG1P6H3BVE0 249 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 CCRL2O00421 344 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 DEGS1O15121 323 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 ARL6IP5O75915 188 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 OR7C1O76099 320 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-215ENST00000478531 TNFAIP8O95379 198 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 FSHBP01225 129 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 MMP9P14780 707 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 CCL3L1P16619 93 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 OR3A1P47881 315 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 BMXP51813 675 aa5.67□□□□□ -1.5
BRCA1-215ENST00000478531 RBM11P57052 281 aaKnown RBP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms