RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 OR4S1Q8NGB4 309 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 CNIH3Q8TBE1 160 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 PIFOQ8TCI5 191 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 ZNF714Q96N38 554 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 SPACA5Q96QH8 159 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 TBL2Q9Y4P3 447 aaKnown RBP19.01■□□□□ 0.63
C9orf3-215ENST00000478473 RNF114Q9Y508 228 aa19.01■□□□□ 0.63
C9orf3-215ENST00000478473 SH2D1BO14796 132 aa19■□□□□ 0.63
C9orf3-215ENST00000478473 CSN2P05814 226 aa19■□□□□ 0.63
C9orf3-215ENST00000478473 OCM2P0CE71 109 aa19■□□□□ 0.63
C9orf3-215ENST00000478473 OCMP0CE72 109 aaPredicted RBP19■□□□□ 0.63
C9orf3-215ENST00000478473 DUSP1P28562 367 aa19■□□□□ 0.63
C9orf3-215ENST00000478473 BMXP51813 675 aa19■□□□□ 0.63
C9orf3-215ENST00000478473 RCN1Q15293 331 aa19■□□□□ 0.63
C9orf3-215ENST00000478473 DHRS7BQ6IAN0 325 aaPredicted RBP19■□□□□ 0.63
C9orf3-215ENST00000478473 TMPRSS11AQ6ZMR5 421 aa19■□□□□ 0.63
C9orf3-215ENST00000478473 DHRSXQ8N5I4 330 aa19■□□□□ 0.63
C9orf3-215ENST00000478473 ZNF485Q8NCK3 441 aa19■□□□□ 0.63
C9orf3-215ENST00000478473 OR13D1Q8NGV5 346 aa19■□□□□ 0.63
C9orf3-215ENST00000478473 CORO2AQ92828 525 aa19■□□□□ 0.63
C9orf3-215ENST00000478473 RFT1Q96AA3 541 aa19■□□□□ 0.63
C9orf3-215ENST00000478473 EXOSC1Q9Y3B2 195 aaKnown RBP19■□□□□ 0.63
C9orf3-215ENST00000478473 H3BUX3 64 aa18.99■□□□□ 0.63
C9orf3-215ENST00000478473 OR2H2O95918 312 aa18.99■□□□□ 0.63
C9orf3-215ENST00000478473 GABRR1P24046 479 aa18.99■□□□□ 0.63
C9orf3-215ENST00000478473 P2RX3P56373 397 aa18.99■□□□□ 0.63
C9orf3-215ENST00000478473 LRRC36Q1X8D7 754 aa18.99■□□□□ 0.63
C9orf3-215ENST00000478473 OGFRL1Q5TC84 451 aaPredicted RBP18.99■□□□□ 0.63
C9orf3-215ENST00000478473 Q6P435 159 aa18.99■□□□□ 0.63
C9orf3-215ENST00000478473 ASCL4Q6XD76 172 aa18.99■□□□□ 0.63
C9orf3-215ENST00000478473 ZNF782Q6ZMW2 699 aaPredicted RBP18.99■□□□□ 0.63
C9orf3-215ENST00000478473 CHST4Q8NCG5 386 aa18.99■□□□□ 0.63
C9orf3-215ENST00000478473 OR52N1Q8NH53 320 aa18.99■□□□□ 0.63
C9orf3-215ENST00000478473 GPR148Q8TDV2 347 aa18.99■□□□□ 0.63
C9orf3-215ENST00000478473 MALSU1Q96EH3 234 aa18.99■□□□□ 0.63
C9orf3-215ENST00000478473 CPNE2Q96FN4 548 aaPredicted RBP18.99■□□□□ 0.63
C9orf3-215ENST00000478473 CDCA4Q9BXL8 241 aa18.99■□□□□ 0.63
C9orf3-215ENST00000478473 EXOSC4Q9NPD3 245 aaKnown RBP18.99■□□□□ 0.63
C9orf3-215ENST00000478473 BABAM2Q9NXR7 383 aa18.99■□□□□ 0.63
C9orf3-215ENST00000478473 UBE2J1Q9Y385 318 aaPredicted RBP18.99■□□□□ 0.63
C9orf3-215ENST00000478473 ALDOBP05062 364 aa18.98■□□□□ 0.63
C9orf3-215ENST00000478473 COX7A1P24310 79 aa18.98■□□□□ 0.63
C9orf3-215ENST00000478473 MTNR1BP49286 362 aa18.98■□□□□ 0.63
C9orf3-215ENST00000478473 LGALS4P56470 323 aa18.98■□□□□ 0.63
C9orf3-215ENST00000478473 KRTAP10-3P60369 221 aa18.98■□□□□ 0.63
C9orf3-215ENST00000478473 LDLRAD2Q5SZI1 272 aa18.98■□□□□ 0.63
C9orf3-215ENST00000478473 OR2G6Q5TZ20 316 aa18.98■□□□□ 0.63
C9orf3-215ENST00000478473 LIAT1Q6ZQX7 453 aa18.98■□□□□ 0.63
C9orf3-215ENST00000478473 OR5D18Q8NGL1 313 aa18.98■□□□□ 0.63
C9orf3-215ENST00000478473 FBLIM1Q8WUP2 373 aa18.98■□□□□ 0.63
C9orf3-215ENST00000478473 TSEN15Q8WW01 171 aaKnown RBP18.98■□□□□ 0.63
C9orf3-215ENST00000478473 CYGBQ8WWM9 190 aa18.98■□□□□ 0.63
C9orf3-215ENST00000478473 CHST6Q9GZX3 395 aa18.98■□□□□ 0.63
C9orf3-215ENST00000478473 FBLN5Q9UBX5 448 aa18.98■□□□□ 0.63
C9orf3-215ENST00000478473 GSTK1Q9Y2Q3 226 aa18.98■□□□□ 0.63
C9orf3-215ENST00000478473 PCDHGB5Q9Y5G0 923 aa18.98■□□□□ 0.63
C9orf3-215ENST00000478473 A0A0G2JK05 382 aa18.97■□□□□ 0.63
C9orf3-215ENST00000478473 MEGF11A6BM72 1044 aa18.97■□□□□ 0.63
C9orf3-215ENST00000478473 HCKP08631 526 aa18.97■□□□□ 0.63
C9orf3-215ENST00000478473 RAB3AP20336 220 aa18.97■□□□□ 0.63
C9orf3-215ENST00000478473 EDDM3AQ14507 147 aa18.97■□□□□ 0.63
C9orf3-215ENST00000478473 OR51T1Q8NGJ9 327 aa18.97■□□□□ 0.63
C9orf3-215ENST00000478473 FOXRED1Q96CU9 486 aaPredicted RBP18.97■□□□□ 0.63
C9orf3-215ENST00000478473 SMIM19Q96E16 107 aa18.97■□□□□ 0.63
C9orf3-215ENST00000478473 TMEM80Q96HE8 168 aa18.97■□□□□ 0.63
C9orf3-215ENST00000478473 SIRT4Q9Y6E7 314 aaPredicted RBP18.97■□□□□ 0.63
C9orf3-215ENST00000478473 SESN1Q9Y6P5 492 aa18.97■□□□□ 0.63
C9orf3-215ENST00000478473 FUOMA2VDF0 154 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 LALBAP00709 142 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 CD2P06729 351 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 CALCBP10092 127 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 MYL12AP19105 171 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 DYNLT3P51808 116 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 SRSF4Q08170 494 aaKnown RBP18.96■□□□□ 0.63
C9orf3-215ENST00000478473 DMKNQ6E0U4 476 aaPredicted RBP18.96■□□□□ 0.63
C9orf3-215ENST00000478473 LAIR2Q6ISS4 152 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 LHFPL4Q7Z7J7 247 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 TPRX1Q8N7U7 411 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 OR51A2Q8NGJ7 313 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 NCOR1P1Q9H4R4 102 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 RANBP3Q9H6Z4 567 aaPredicted RBP18.96■□□□□ 0.63
C9orf3-215ENST00000478473 RAB18Q9NP72 206 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 PLCXD1Q9NUJ7 323 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 TAS2R3Q9NYW6 316 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 CNOT2Q9NZN8 540 aaKnown RBP18.96■□□□□ 0.63
C9orf3-215ENST00000478473 CLEC2DQ9UHP7 191 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 ZNF281Q9Y2X9 895 aa18.96■□□□□ 0.63
C9orf3-215ENST00000478473 SIRPB1O00241 398 aa18.95■□□□□ 0.62
C9orf3-215ENST00000478473 SLC33A1O00400 549 aaPredicted RBP18.95■□□□□ 0.62
C9orf3-215ENST00000478473 GPX5O75715 221 aa18.95■□□□□ 0.62
C9orf3-215ENST00000478473 TMEM225BP0DP42 221 aa18.95■□□□□ 0.62
C9orf3-215ENST00000478473 CAPGP40121 348 aa18.95■□□□□ 0.62
C9orf3-215ENST00000478473 KIR2DS4P43632 304 aa18.95■□□□□ 0.62
C9orf3-215ENST00000478473 PAX5Q02548 391 aa18.95■□□□□ 0.62
C9orf3-215ENST00000478473 MINOS1Q5TGZ0 78 aa18.95■□□□□ 0.62
C9orf3-215ENST00000478473 SLC35E4Q6ICL7 350 aa18.95■□□□□ 0.62
C9orf3-215ENST00000478473 DYNAPQ8N1N2 210 aa18.95■□□□□ 0.62
C9orf3-215ENST00000478473 GGHQ92820 318 aa18.95■□□□□ 0.62
C9orf3-215ENST00000478473 TMEM106AQ96A25 262 aa18.95■□□□□ 0.62
C9orf3-215ENST00000478473 MINOS1-NBL1R4GNA1 71 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms