RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 ST3GAL6Q9Y274 331 aa16.57■□□□□ 0.24
ACTB-210ENST00000477812 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.57■□□□□ 0.241e-13■■□□□ 12.6
ACTB-210ENST00000477812 TMEM272A0A1B0GTI8 110 aa16.56■□□□□ 0.24
ACTB-210ENST00000477812 DVL1O14640 695 aa16.56■□□□□ 0.24
ACTB-210ENST00000477812 GEMIN2O14893 280 aaKnown RBP16.56■□□□□ 0.24
ACTB-210ENST00000477812 PSPNO60542 156 aa16.56■□□□□ 0.24
ACTB-210ENST00000477812 OR2H2O95918 312 aa16.56■□□□□ 0.24
ACTB-210ENST00000477812 CHRM2P08172 466 aa16.56■□□□□ 0.24
ACTB-210ENST00000477812 IGHV4-31P0DP07 118 aa16.56■□□□□ 0.24
ACTB-210ENST00000477812 ZFP36P26651 326 aaKnown RBP16.56■□□□□ 0.24
ACTB-210ENST00000477812 RPS27AP62979 156 aaKnown RBP16.56■□□□□ 0.24
ACTB-210ENST00000477812 KRTAP1-1Q07627 177 aa16.56■□□□□ 0.24
ACTB-210ENST00000477812 C2orf76Q3KRA6 126 aa16.56■□□□□ 0.24
ACTB-210ENST00000477812 WDR25Q64LD2 544 aaPredicted RBP16.56■□□□□ 0.24
ACTB-210ENST00000477812 C17orf107Q6ZR85 190 aa16.56■□□□□ 0.24
ACTB-210ENST00000477812 MED30Q96HR3 178 aa16.56■□□□□ 0.24
ACTB-210ENST00000477812 TM2D1Q9BX74 207 aa16.56■□□□□ 0.24
ACTB-210ENST00000477812 SELENOIQ9C0D9 397 aa16.56■□□□□ 0.24
ACTB-210ENST00000477812 OR5V1Q9UGF6 321 aa16.56■□□□□ 0.24
ACTB-210ENST00000477812 CSPG4Q6UVK1 2322 aa16.56■□□□□ 0.24
ACTB-210ENST00000477812 SH2D1BO14796 132 aa16.55■□□□□ 0.24
ACTB-210ENST00000477812 TMEM127O75204 238 aa16.55■□□□□ 0.24
ACTB-210ENST00000477812 MPIG6BO95866 241 aa16.55■□□□□ 0.24
ACTB-210ENST00000477812 HEXAP06865 529 aa16.55■□□□□ 0.24
ACTB-210ENST00000477812 IKZF1Q13422 519 aa16.55■□□□□ 0.24
ACTB-210ENST00000477812 PDCD1Q15116 288 aa16.55■□□□□ 0.24
ACTB-210ENST00000477812 TAF9Q16594 264 aa16.55■□□□□ 0.24
ACTB-210ENST00000477812 MPV17LQ2QL34 196 aa16.55■□□□□ 0.24
ACTB-210ENST00000477812 LINC00596Q86U02 117 aa16.55■□□□□ 0.24
ACTB-210ENST00000477812 CROCCP3Q8IVE0 287 aa16.55■□□□□ 0.24
ACTB-210ENST00000477812 CHST4Q8NCG5 386 aa16.55■□□□□ 0.24
ACTB-210ENST00000477812 DACT3Q96B18 629 aaPredicted RBP16.55■□□□□ 0.24
ACTB-210ENST00000477812 C18orf12Q96KH6 178 aa16.55■□□□□ 0.24
ACTB-210ENST00000477812 SSBP3Q9BWW4 388 aaPredicted RBP16.55■□□□□ 0.24
ACTB-210ENST00000477812 TMEM59Q9BXS4 323 aa16.55■□□□□ 0.24
ACTB-210ENST00000477812 SHARPINQ9H0F6 387 aa16.55■□□□□ 0.24
ACTB-210ENST00000477812 LPAR5Q9H1C0 372 aa16.55■□□□□ 0.24
ACTB-210ENST00000477812 RCC2Q9P258 522 aaKnown RBP16.55■□□□□ 0.24
ACTB-210ENST00000477812 POLR3KQ9Y2Y1 108 aaPredicted RBP16.55■□□□□ 0.24
ACTB-210ENST00000477812 ABCA1O95477 2261 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 F8P00451 2351 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 A0A0A6YYD4 124 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 TRAV24A0A0B4J272 114 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 K7N7A8 449 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 ZNF701M0R085 212 aaPredicted RBP16.54■□□□□ 0.24
ACTB-210ENST00000477812 SLC33A1O00400 549 aaPredicted RBP16.54■□□□□ 0.24
ACTB-210ENST00000477812 SMAD7O15105 426 aaKnown RBP16.54■□□□□ 0.24
ACTB-210ENST00000477812 PHF1O43189 567 aaPredicted RBP16.54■□□□□ 0.24
ACTB-210ENST00000477812 PAHP00439 452 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 SNRPBP14678 240 aaKnown RBP16.54■□□□□ 0.24
ACTB-210ENST00000477812 RANBP1P43487 201 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 OR3A1P47881 315 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 NPY4RP50391 375 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 EFNB2P52799 333 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 ESCO2Q56NI9 601 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 SIGIRRQ6IA17 410 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 METAP1DQ6UB28 335 aaPredicted RBP16.54■□□□□ 0.24
ACTB-210ENST00000477812 BIVMQ86UB2 503 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 LGALS14Q8TCE9 139 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 MSI2Q96DH6 328 aaKnown RBP16.54■□□□□ 0.24
ACTB-210ENST00000477812 POM121Q96HA1 1249 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 FAM234AQ9H0X4 552 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 CLN8Q9UBY8 286 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 GLS2Q9UI32 602 aa16.54■□□□□ 0.24
ACTB-210ENST00000477812 SMIM31A0A1B0GVY4 71 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 DPPA5A6NC42 116 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 FAM90A10PA6NDY2 464 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 FAM90A18PA6NE21 464 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 FAM90A16PA6NEW6 464 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 FAM90A20PA6NIJ5 464 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 FAM90A8PA6NJQ4 464 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 FAM90A7PA6NKC0 464 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 FOXI3A8MTJ6 420 aaPredicted RBP16.53■□□□□ 0.24
ACTB-210ENST00000477812 FAM90A22PA8MWA6 464 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 FAM90A12PA8MX19 464 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 FAM90A5PA8MXJ8 464 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 FAM90A23PA8MXZ1 464 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 SIRPB1O00241 398 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 DEGS1O15121 323 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 NDUFB3O43676 98 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 TK1P04183 234 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 FAM90A15PP0C7V4 464 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 FAM90A13PP0C7W8 464 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 FAM90A14PP0C7W9 464 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 FAM90A24PP0C7X0 464 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 SCAND1P57086 179 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 GNB2P62879 340 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 PAX2Q02962 417 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 IDNKQ5T6J7 187 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 FAM89BQ8N5H3 189 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 TMEM185AQ8NFB2 350 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 OR4S1Q8NGB4 309 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 PTX4Q96A99 478 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 SNX22Q96L94 193 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 NICN1Q9BSH3 213 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 SLC25A10Q9UBX3 287 aaPredicted RBP16.53■□□□□ 0.24
ACTB-210ENST00000477812 TLN2Q9Y4G6 2542 aa16.53■□□□□ 0.24
ACTB-210ENST00000477812 B4DSR2 109 aa16.52■□□□□ 0.24
ACTB-210ENST00000477812 C22orf46C9J442 243 aa16.52■□□□□ 0.24
ACTB-210ENST00000477812 NOL3O60936 208 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms