RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 TSPAN9O75954 239 aa17.67■□□□□ 0.42
COL9A3-211ENST00000477612 IGHV1-8P0DP01 117 aa17.67■□□□□ 0.42
COL9A3-211ENST00000477612 TGFBR2P37173 567 aa17.67■□□□□ 0.42
COL9A3-211ENST00000477612 OR3A1P47881 315 aa17.67■□□□□ 0.42
COL9A3-211ENST00000477612 Q6ZSV7 163 aa17.67■□□□□ 0.42
COL9A3-211ENST00000477612 ZNF485Q8NCK3 441 aa17.67■□□□□ 0.42
COL9A3-211ENST00000477612 PXT1Q8NFP0 134 aa17.67■□□□□ 0.42
COL9A3-211ENST00000477612 OR11H6Q8NGC7 330 aa17.67■□□□□ 0.42
COL9A3-211ENST00000477612 OR5D18Q8NGL1 313 aa17.67■□□□□ 0.42
COL9A3-211ENST00000477612 GPR148Q8TDV2 347 aa17.67■□□□□ 0.42
COL9A3-211ENST00000477612 TSEN15Q8WW01 171 aaKnown RBP17.67■□□□□ 0.42
COL9A3-211ENST00000477612 TMEM80Q96HE8 168 aa17.67■□□□□ 0.42
COL9A3-211ENST00000477612 ZNF714Q96N38 554 aa17.67■□□□□ 0.42
COL9A3-211ENST00000477612 SSX3Q99909 188 aa17.67■□□□□ 0.42
COL9A3-211ENST00000477612 EXOSC4Q9NPD3 245 aaKnown RBP17.67■□□□□ 0.42
COL9A3-211ENST00000477612 ODF3BA8MYP8 253 aa17.66■□□□□ 0.42
COL9A3-211ENST00000477612 OR2H2O95918 312 aa17.66■□□□□ 0.42
COL9A3-211ENST00000477612 HCKP08631 526 aa17.66■□□□□ 0.42
COL9A3-211ENST00000477612 RAB3AP20336 220 aa17.66■□□□□ 0.42
COL9A3-211ENST00000477612 GABRR1P24046 479 aa17.66■□□□□ 0.42
COL9A3-211ENST00000477612 BMXP51813 675 aa17.66■□□□□ 0.42
COL9A3-211ENST00000477612 ELP2Q6IA86 826 aa17.66■□□□□ 0.42
COL9A3-211ENST00000477612 Q6P435 159 aa17.66■□□□□ 0.42
COL9A3-211ENST00000477612 OR52N1Q8NH53 320 aa17.66■□□□□ 0.42
COL9A3-211ENST00000477612 FBLIM1Q8WUP2 373 aa17.66■□□□□ 0.42
COL9A3-211ENST00000477612 GGHQ92820 318 aa17.66■□□□□ 0.42
COL9A3-211ENST00000477612 CHST6Q9GZX3 395 aa17.66■□□□□ 0.42
COL9A3-211ENST00000477612 GSTK1Q9Y2Q3 226 aa17.66■□□□□ 0.42
COL9A3-211ENST00000477612 TBL2Q9Y4P3 447 aaKnown RBP17.66■□□□□ 0.42
COL9A3-211ENST00000477612 SIRT4Q9Y6E7 314 aaPredicted RBP17.66■□□□□ 0.42
COL9A3-211ENST00000477612 CLPXO76031 633 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 ALDOBP05062 364 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 CSN2P05814 226 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 CALCBP10092 127 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 MYL12AP19105 171 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 CAPGP40121 348 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 LGALS4P56470 323 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 EDDM3AQ14507 147 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 ZNF626Q68DY1 528 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 LAIR2Q6ISS4 152 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 ZNF782Q6ZMW2 699 aaPredicted RBP17.65■□□□□ 0.42
COL9A3-211ENST00000477612 Q8NFD4 153 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 OR13D1Q8NGV5 346 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 CORO2AQ92828 525 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 SMIM19Q96E16 107 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 CPNE2Q96FN4 548 aaPredicted RBP17.65■□□□□ 0.42
COL9A3-211ENST00000477612 PLCXD1Q9NUJ7 323 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 CLEC2DQ9UHP7 191 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 UBE2J1Q9Y385 318 aaPredicted RBP17.65■□□□□ 0.42
COL9A3-211ENST00000477612 RNF114Q9Y508 228 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 PCDHGB5Q9Y5G0 923 aa17.65■□□□□ 0.42
COL9A3-211ENST00000477612 A0A0G2JK05 382 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 H3BUX3 64 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 LALBAP00709 142 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 CD2P06729 351 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 TMEM225BP0DP42 221 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 COX7A1P24310 79 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 MTNR1BP49286 362 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 P2RX3P56373 397 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 PROK1P58294 105 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 MED21Q13503 144 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 LRRC75BQ2VPJ9 315 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 DMKNQ6E0U4 476 aaPredicted RBP17.64■□□□□ 0.41
COL9A3-211ENST00000477612 DHRS7BQ6IAN0 325 aaPredicted RBP17.64■□□□□ 0.41
COL9A3-211ENST00000477612 ASCL4Q6XD76 172 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 TPRX1Q8N7U7 411 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 CHST4Q8NCG5 386 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 OR51A2Q8NGJ7 313 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 PIFOQ8TCI5 191 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 CITED1Q99966 193 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 CNOT2Q9NZN8 540 aaKnown RBP17.64■□□□□ 0.41
COL9A3-211ENST00000477612 ZNF281Q9Y2X9 895 aa17.64■□□□□ 0.41
COL9A3-211ENST00000477612 FUOMA2VDF0 154 aa17.63■□□□□ 0.41
COL9A3-211ENST00000477612 VGLL3A8MV65 326 aa17.63■□□□□ 0.41
COL9A3-211ENST00000477612 SIRPB1O00241 398 aa17.63■□□□□ 0.41
COL9A3-211ENST00000477612 SOX2P48431 317 aa17.63■□□□□ 0.41
COL9A3-211ENST00000477612 SNU13P55769 128 aaKnown RBP17.63■□□□□ 0.41
COL9A3-211ENST00000477612 ST3GAL4Q11206 333 aa17.63■□□□□ 0.41
COL9A3-211ENST00000477612 C8orf59Q8N0T1 100 aaPredicted RBP17.63■□□□□ 0.41
COL9A3-211ENST00000477612 TMEM106AQ96A25 262 aa17.63■□□□□ 0.41
COL9A3-211ENST00000477612 MALSU1Q96EH3 234 aa17.63■□□□□ 0.41
COL9A3-211ENST00000477612 DCLRE1BQ9H816 532 aa17.63■□□□□ 0.41
COL9A3-211ENST00000477612 CHCHD3Q9NX63 227 aaKnown RBP17.63■□□□□ 0.41
COL9A3-211ENST00000477612 MGAM2Q2M2H8 2515 aa17.63■□□□□ 0.41
COL9A3-211ENST00000477612 MEX3AA1L020 520 aaKnown RBP17.62■□□□□ 0.41
COL9A3-211ENST00000477612 EFCAB10A6NFE3 127 aa17.62■□□□□ 0.41
COL9A3-211ENST00000477612 GABRPO00591 440 aa17.62■□□□□ 0.41
COL9A3-211ENST00000477612 MAGEB3O15480 346 aa17.62■□□□□ 0.41
COL9A3-211ENST00000477612 GNAO1P09471 354 aa17.62■□□□□ 0.41
COL9A3-211ENST00000477612 LHFPL4Q7Z7J7 247 aa17.62■□□□□ 0.41
COL9A3-211ENST00000477612 OR51T1Q8NGJ9 327 aa17.62■□□□□ 0.41
COL9A3-211ENST00000477612 TAS2R4Q9NYW5 299 aa17.62■□□□□ 0.41
COL9A3-211ENST00000477612 TAS2R3Q9NYW6 316 aa17.62■□□□□ 0.41
COL9A3-211ENST00000477612 SESN1Q9Y6P5 492 aa17.62■□□□□ 0.41
COL9A3-211ENST00000477612 TRBV5-5A0A0J9YX44 114 aa17.61■□□□□ 0.41
COL9A3-211ENST00000477612 ANKRD65E5RJM6 399 aa17.61■□□□□ 0.41
COL9A3-211ENST00000477612 SLC33A1O00400 549 aaPredicted RBP17.61■□□□□ 0.41
COL9A3-211ENST00000477612 GPX5O75715 221 aa17.61■□□□□ 0.41
COL9A3-211ENST00000477612 ARG1P05089 322 aa17.61■□□□□ 0.41
COL9A3-211ENST00000477612 ZNF44P15621 663 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms