RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 Q6P435 159 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 METAP1DQ6UB28 335 aaPredicted RBP13.51□□□□□ -0.25
VHL-203ENST00000477538 ZNF788Q6ZQV5 615 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 CD177Q8N6Q3 437 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 POM121Q96HA1 1249 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 GAFA1Q96PS6 74 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 C6orf62Q9GZU0 229 aaPredicted RBP13.51□□□□□ -0.25
VHL-203ENST00000477538 NXF2Q9GZY0 626 aaKnown RBP13.51□□□□□ -0.25
VHL-203ENST00000477538 ATG5Q9H1Y0 275 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 ZNF665Q9H7R5 613 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 SEBOXQ9HB31 216 aaPredicted RBP13.51□□□□□ -0.25
VHL-203ENST00000477538 ZNF581Q9P0T4 197 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 PCDHB10Q9UN67 800 aa13.51□□□□□ -0.25
VHL-203ENST00000477538 A0A0A6YYD4 124 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 METTL21EPA6NDL7 271 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 SIRPB1O00241 398 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 DEGS1O15121 323 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 TMPRSS2O15393 492 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 ADAM20O43506 726 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 HPGDSO60760 199 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 CHRM2P08172 466 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 RPS2P15880 293 aaKnown RBP13.5□□□□□ -0.25
VHL-203ENST00000477538 VEGFCP49767 419 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 IL13RA1P78552 427 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 COL10A1Q03692 680 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 LYPD2Q6UXB3 125 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 SLC36A1Q7Z2H8 476 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 BIVMQ86UB2 503 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 ZNF561Q8N587 486 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 FAM89BQ8N5H3 189 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 FAM216BQ8N7L0 139 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 OR56B1Q8NGI3 324 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 SDSLQ96GA7 329 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 Q96MF0 132 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 KAAG1Q9UBP8 84 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 MIOXQ9UGB7 285 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 METRNQ9UJH8 293 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 A3GALT2U3KPV4 340 aa13.5□□□□□ -0.25
VHL-203ENST00000477538 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.49□□□□□ -0.25
VHL-203ENST00000477538 MAP1AP78559 2803 aaPredicted RBP13.49□□□□□ -0.25
VHL-203ENST00000477538 A0A1B0GW55 424 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 SIGLEC5O15389 551 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 RGS5O15539 181 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 DUX4L2P0CJ85 424 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 DUX4L3P0CJ86 424 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 DUX4L4P0CJ87 422 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 DUX4L5P0CJ88 424 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 DUX4L6P0CJ89 424 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 DUX4L7P0CJ90 424 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 BLVRBP30043 206 aaPredicted RBP13.49□□□□□ -0.25
VHL-203ENST00000477538 PITPNBP48739 271 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 ATAD3CQ5T2N8 411 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 SIGIRRQ6IA17 410 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 DUX4L9Q6RFH8 374 aaPredicted RBP13.49□□□□□ -0.25
VHL-203ENST00000477538 CMTM4Q8IZR5 234 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 ASCC1Q8N9N2 400 aaKnown RBP13.49□□□□□ -0.25
VHL-203ENST00000477538 CHST4Q8NCG5 386 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 CLDND2Q8NHS1 167 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 RAB40AQ8WXH6 277 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 MED30Q96HR3 178 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 CMTM3Q96MX0 182 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 ABCG5Q9H222 651 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 MMP27Q9H306 513 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 IFT22Q9H7X7 185 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 PATZ1Q9HBE1 687 aaKnown RBP13.49□□□□□ -0.25
VHL-203ENST00000477538 CTSZQ9UBR2 303 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 DUX4Q9UBX2 424 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 MAB21L2Q9Y586 359 aa13.49□□□□□ -0.25
VHL-203ENST00000477538 IGHV4-61A0A0C4DH41 118 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 H3BUI4 141 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 SLC33A1O00400 549 aaPredicted RBP13.48□□□□□ -0.25
VHL-203ENST00000477538 CTDSP2O14595 271 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 SOCS1O15524 211 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 PDCD6O75340 191 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 APOA1P02647 267 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 EIF4EP06730 217 aaKnown RBP13.48□□□□□ -0.25
VHL-203ENST00000477538 SELLP14151 372 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 LMO1P25800 156 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 MOGAT2Q3SYC2 334 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 PAN3Q58A45 887 aaKnown RBP13.48□□□□□ -0.25
VHL-203ENST00000477538 NLRC3Q7RTR2 1065 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 ZNRF1Q8ND25 227 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 TMEM185AQ8NFB2 350 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 OR8B3Q8NGG8 313 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 PHF21AQ96BD5 680 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 NEIL1Q96FI4 390 aaPredicted RBP13.48□□□□□ -0.25
VHL-203ENST00000477538 NEDD4LQ96PU5 975 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 OR8B2Q96RD0 313 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 MIXL1Q9H2W2 232 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 SPACA1Q9HBV2 294 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 RCC2Q9P258 522 aaKnown RBP13.48□□□□□ -0.25
VHL-203ENST00000477538 ITGB1BP2Q9UKP3 347 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 ITPR3Q14573 2671 aa13.48□□□□□ -0.25
VHL-203ENST00000477538 TRAV24A0A0B4J272 114 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 TMEM82A0PJX8 343 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 FOXI3A8MTJ6 420 aaPredicted RBP13.47□□□□□ -0.25
VHL-203ENST00000477538 FAM25AB3EWG3 89 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 FAM25CB3EWG5 89 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 FAM25GB3EWG6 89 aa13.47□□□□□ -0.25
VHL-203ENST00000477538 F5H0A9 414 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms