RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 HMGN3Q15651 99 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 HIKESHIQ53FT3 197 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 PEG10Q86TG7 708 aaKnown RBP7.31□□□□□ -1.24
VAPB-205ENST00000476395 ZFP62Q8NB50 900 aaPredicted RBP7.31□□□□□ -1.24
VAPB-205ENST00000476395 OR1N1Q8NGS0 311 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 OR13G1Q8NGZ3 307 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 TERB2Q8NHR7 220 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 MRPL24Q96A35 216 aaKnown RBP7.31□□□□□ -1.24
VAPB-205ENST00000476395 C2orf50Q96LR7 162 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 VN1R1Q9GZP7 353 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 GAL3ST2Q9H3Q3 398 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 HHLA2Q9UM44 414 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 KIAA1549Q9HCM3 1950 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 A0A1W2PPQ1 181 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 LILRA5A6NI73 299 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 NUDT21O43809 227 aaKnown RBP7.31□□□□□ -1.24
VAPB-205ENST00000476395 LIPFP07098 398 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 CHATP28329 748 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 PTGER4P35408 488 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 P2RY6Q15077 328 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 EIF5AL1Q6IS14 154 aaKnown RBP7.31□□□□□ -1.24
VAPB-205ENST00000476395 LHFPL1Q86WI0 220 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 SMRP1Q8NCR6 262 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 STT3BQ8TCJ2 826 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 RLN3Q8WXF3 142 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 ST6GALNAC5Q9BVH7 336 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 KCNIP3Q9Y2W7 256 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 CCDC187A0A096LP49 1063 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 XKRYO14609 159 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 CRYABP02511 175 aaKnown RBP7.31□□□□□ -1.24
VAPB-205ENST00000476395 FOLR1P15328 257 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 RND3P61587 244 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 CYCSP99999 105 aaKnown RBP7.31□□□□□ -1.24
VAPB-205ENST00000476395 SLC10A1Q14973 349 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 TSPO2Q5TGU0 170 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 GRINAQ7Z429 371 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 C11orf40Q8WZ69 217 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 DIRC2Q96SL1 478 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 RAB18Q9NP72 206 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 SEMA5BQ9P283 1151 aa7.31□□□□□ -1.24
VAPB-205ENST00000476395 COLQQ9Y215 455 aaPredicted RBP7.31□□□□□ -1.24
VAPB-205ENST00000476395 IGHV3-20A0A0C4DH32 117 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 A0A1B0GUS0 222 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 PNLIPP16233 465 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 DTYMKP23919 212 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 HSD11B1P28845 292 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 DNASE1L1P49184 302 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 JOSD1Q15040 202 aaPredicted RBP7.3□□□□□ -1.24
VAPB-205ENST00000476395 ADIPOQQ15848 244 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 FAHD2BQ6P2I3 314 aaPredicted RBP7.3□□□□□ -1.24
VAPB-205ENST00000476395 C1QL2Q7Z5L3 287 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 NFAM1Q8NET5 270 aaPredicted RBP7.3□□□□□ -1.24
VAPB-205ENST00000476395 WFDC12Q8WWY7 111 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 FAHD2AQ96GK7 314 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 PPIAL4AQ9Y536 164 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 POMT1Q9Y6A1 747 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 IGKV1D-8A0A087WSZ0 117 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 TLCD2A6NGC4 264 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 NPIPA2E9PIF3 369 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 IGLV3-1P01715 115 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 CDKN1BP46527 198 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 OR3A4PP47883 348 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 RPL29P47914 159 aaKnown RBP7.3□□□□□ -1.24
VAPB-205ENST00000476395 TFPI2P48307 235 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 TDGF1P3P51864 188 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 SLC38A9Q8NBW4 561 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 NEK7Q8TDX7 302 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 FAM71F1Q96KD3 344 aaPredicted RBP7.3□□□□□ -1.24
VAPB-205ENST00000476395 FAM210BQ96KR6 192 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 EMC6Q9BV81 110 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 PBOV1Q9GZY1 135 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 PARD6AQ9NPB6 346 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 TTC28Q96AY4 2481 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 MYO7BQ6PIF6 2116 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 TMEM265A0A087WTH1 108 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 NPIPB13A6NJU9 1138 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 NPIPB4C9JG80 1138 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 JTBO76095 146 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 SELEP16581 610 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 CLDN17P56750 224 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 FBXW4P57775 412 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 PLCXD2Q0VAA5 305 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 BATFQ16520 125 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 RSPO1Q2MKA7 263 aaPredicted RBP7.3□□□□□ -1.24
VAPB-205ENST00000476395 TMEM176BQ3YBM2 270 aaPredicted RBP7.3□□□□□ -1.24
VAPB-205ENST00000476395 KCTD18Q6PI47 426 aaPredicted RBP7.3□□□□□ -1.24
VAPB-205ENST00000476395 ZNF429Q86V71 674 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 NECAP1Q8NC96 275 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 OR2AJ1Q8NGZ0 328 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 LYZL4Q96KX0 146 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 PRO3102Q9H379 93 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 LIME1Q9H400 295 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 CHODLQ9H9P2 273 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 SEC16AO15027 2179 aa7.3□□□□□ -1.24
VAPB-205ENST00000476395 DLEU1O43261 78 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 GALR2O43603 387 aaPredicted RBP7.29□□□□□ -1.24
VAPB-205ENST00000476395 DEDDO75618 318 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 MYF5P13349 255 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 PGCP20142 388 aa7.29□□□□□ -1.24
VAPB-205ENST00000476395 FGF7P21781 194 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms