RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 PLXNC1O60486 1568 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 CUX1P39880 1505 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 RPRD2Q5VT52 1461 aaKnown RBP3.31□□□□□ -1.88
SDHB-205ENST00000475506 PTPRGP23470 1445 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 NAIPQ13075 1403 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 CENPVL3A0A0U1RRI6 287 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 TMEM213A2RRL7 107 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 LIMS3P0CW19 117 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 LIMS4P0CW20 117 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 ZNF35P13682 527 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 NELFEP18615 380 aaKnown RBP3.31□□□□□ -1.88
SDHB-205ENST00000475506 TTPAP49638 278 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 PLTPP55058 493 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 MEF2CQ06413 473 aaPredicted RBP3.31□□□□□ -1.88
SDHB-205ENST00000475506 PIGHQ14442 188 aaPredicted RBP3.31□□□□□ -1.88
SDHB-205ENST00000475506 SP6Q3SY56 376 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 USP50Q70EL3 339 aaPredicted RBP3.31□□□□□ -1.88
SDHB-205ENST00000475506 PDPNQ86YL7 162 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 ORMDL3Q8N138 153 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 FAM57AQ8TBR7 257 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 ORAOV1Q8WV07 137 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 PGLYRP3Q96LB9 341 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 TBL1XR1Q9BZK7 514 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 TSGA10Q9BZW7 698 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 METTL8Q9H825 291 aaKnown RBP3.31□□□□□ -1.88
SDHB-205ENST00000475506 WDR54Q9H977 334 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 ASCL3Q9NQ33 180 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 DIABLOQ9NR28 239 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 C1orf109Q9NX04 203 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 ENOPH1Q9UHY7 261 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 FBXL3Q9UKT7 428 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 RAB22AQ9UL26 194 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 INSIG2Q9Y5U4 225 aa3.31□□□□□ -1.88
SDHB-205ENST00000475506 CFAP43Q8NDM7 1665 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 SHROOM2Q13796 1616 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 SAMD9Q5K651 1589 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 MROH2BQ7Z745 1585 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 GOLGA8IPA6NC78 632 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 CENPBD1B2RD01 187 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 ITGB1BP1O14713 200 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 CRXO43186 299 aaPredicted RBP3.3□□□□□ -1.88
SDHB-205ENST00000475506 SMIM24O75264 130 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 SNAP29O95721 258 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 CYB5R3P00387 301 aaPredicted RBP3.3□□□□□ -1.88
SDHB-205ENST00000475506 CDK1P06493 297 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 MUC1P15941 1255 aaPredicted RBP3.3□□□□□ -1.88
SDHB-205ENST00000475506 IL1RNP18510 177 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 CD40LGP29965 261 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 SLC18A1P54219 525 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 ZNHIT3Q15649 155 aaPredicted RBP3.3□□□□□ -1.88
SDHB-205ENST00000475506 TMEM249Q2WGJ8 235 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 CLEC12AQ5QGZ9 265 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 MORN3Q6PF18 240 aaPredicted RBP3.3□□□□□ -1.88
SDHB-205ENST00000475506 CCDC121Q6ZUS5 278 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 FAM231DQ6ZW35 169 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 TRMT10CQ7L0Y3 403 aaKnown RBP3.3□□□□□ -1.88
SDHB-205ENST00000475506 SSX7Q7RTT5 188 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 OR2Z1Q8NG97 314 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 OR8K1Q8NGG5 319 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 DDI1Q8WTU0 396 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 MRAP2Q96G30 205 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 DERL3Q96Q80 235 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 HBEGFQ99075 208 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 C7orf50Q9BRJ6 194 aaKnown RBP3.3□□□□□ -1.88
SDHB-205ENST00000475506 MS4A8Q9BY19 250 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 VCX3BQ9H321 246 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 DSN1Q9H410 356 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 RDH14Q9HBH5 336 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 PARP11Q9NR21 331 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 SDHAF3Q9NRP4 125 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 IMP3Q9NV31 184 aaKnown RBP3.3□□□□□ -1.88
SDHB-205ENST00000475506 KIF14Q15058 1648 aa3.3□□□□□ -1.88
SDHB-205ENST00000475506 GAPVD1Q14C86 1478 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 CCDC141Q6ZP82 1450 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 FGD6Q6ZV73 1430 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 TUBGCP6Q96RT7 1819 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 IGHV1-3A0A0C4DH29 117 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 C1orf232A0A0U1RR37 186 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 A0A1B0GTI1 187 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 GOLGA8KD6RF30 607 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 LGALS9O00182 355 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 FABP7O15540 132 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 ZNF324O75467 553 aaPredicted RBP3.29□□□□□ -1.88
SDHB-205ENST00000475506 MPZL1O95297 269 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 SEC11BP0C7V7 166 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 PRDX1Q06830 199 aaKnown RBP3.29□□□□□ -1.88
SDHB-205ENST00000475506 EBI3Q14213 229 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 MAPRE2Q15555 327 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 ABCA11PQ4W5N1 156 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 ITPRIPQ8IWB1 547 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 STK40Q8N2I9 435 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 RNF10Q8N5U6 811 aaKnown RBP3.29□□□□□ -1.88
SDHB-205ENST00000475506 ZNF555Q8NEP9 628 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 ERMNQ8TAM6 284 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 SUN5Q8TC36 379 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 FAM45AQ8TCE6 357 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 DYNC2LI1Q8TCX1 351 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 SUCNR1Q9BXA5 334 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 KDM5CP41229 1560 aa3.29□□□□□ -1.88
SDHB-205ENST00000475506 PRXQ9BXM0 1461 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms