RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 OR4D6Q8NGJ1 314 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 OR5M8Q8NGP6 311 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 CORO2AQ92828 525 aa9.97□□□□□ -0.81
SKA3-206ENST00000475251 ELAC2Q9BQ52 826 aaKnown RBP9.97□□□□□ -0.81
SKA3-206ENST00000475251 AMMECR1Q9Y4X0 333 aaPredicted RBP9.97□□□□□ -0.81
SKA3-206ENST00000475251 TRBV2A0A0J9YWF9 115 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 A0A1B0GTI1 187 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 TCRBV5S2A0A599 114 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 CCL24O00175 119 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 GNGT2O14610 69 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 FGF16O43320 207 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 PSPNO60542 156 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 CST1P01037 141 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 RAP2AP10114 183 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 CCL1P22362 96 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 CHATP28329 748 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 PTGFRP43088 359 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 CXCR4P61073 352 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 NKAPLQ5M9Q1 402 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 FAM58AQ8N1B3 248 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 ARHGAP24Q8N264 748 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 OR8U1Q8NH10 309 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 RPEQ96AT9 228 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 GON7Q9BXV9 100 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 TTTY10Q9BZA0 68 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 PRRG3Q9BZD7 231 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 CHST5Q9GZS9 411 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 COPS3Q9UNS2 423 aa9.96□□□□□ -0.82
SKA3-206ENST00000475251 SIRT4Q9Y6E7 314 aaPredicted RBP9.96□□□□□ -0.82
SKA3-206ENST00000475251 A0A087X0M5 115 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 A0A1B0GX30 115 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 PRR32B1ATL7 298 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 SH2D1BO14796 132 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 SYT7O43581 403 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 INMTO95050 263 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 ECI1P42126 302 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 OR3A1P47881 315 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 RBP2P50120 134 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 ATP1B3P54709 279 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 HES1Q14469 280 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 RBM39Q14498 530 aaKnown RBP9.95□□□□□ -0.82
SKA3-206ENST00000475251 UBE2V2Q15819 145 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 TEX38Q6PEX7 206 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 SLC35E3Q7Z769 313 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 C5orf56Q8N8D9 126 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 OR9G1Q8NH87 305 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 TOMM40LQ969M1 308 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 C10orf35Q96D05 121 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 PRR25Q96S07 402 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 ADI1Q9BV57 179 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 ZNF286AQ9HBT8 521 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 SLC25A19Q9HC21 320 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 PALMDQ9NP74 551 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 EXOSC4Q9NPD3 245 aaKnown RBP9.95□□□□□ -0.82
SKA3-206ENST00000475251 KRT84Q9NSB2 600 aa9.95□□□□□ -0.82
SKA3-206ENST00000475251 IGKV1-27A0A075B6S5 117 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 FAM172BPA6NC97 362 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 FAM90A18PA6NE21 464 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 FAM90A16PA6NEW6 464 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 CCDC182A6NF36 153 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 FAM90A20PA6NIJ5 464 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 FAM90A9PA6NNJ1 464 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 FAM90A12PA8MX19 464 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 FAM90A5PA8MXJ8 464 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 ZNF670-ZNF695F2Z2N8 137 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 LY6LH3BQJ8 138 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 ENTPD6O75354 484 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 SNRNP70P08621 437 aaKnown RBP9.94□□□□□ -0.82
SKA3-206ENST00000475251 FAM90A15PP0C7V4 464 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 FAM90A13PP0C7W8 464 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 FAM90A14PP0C7W9 464 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 FAM90A24PP0C7X0 464 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 ANXA8P13928 327 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 TMEM11P17152 192 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 HOXB6P17509 224 aaKnown RBP9.94□□□□□ -0.82
SKA3-206ENST00000475251 PRKACAP17612 351 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 LUMP51884 338 aaPredicted RBP9.94□□□□□ -0.82
SKA3-206ENST00000475251 C18orf65Q6ZTR6 163 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 STPG2Q8N412 459 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 DNAAF1Q8NEP3 725 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 PP6455Q8WZ26 134 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 HRASLS5Q96KN8 279 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 LRGUKQ96M69 825 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 NOL4LQ96MY1 436 aaPredicted RBP9.94□□□□□ -0.82
SKA3-206ENST00000475251 ASCL2Q99929 193 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 APOL4Q9BPW4 351 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 RBFOX1Q9NWB1 397 aaKnown RBP9.94□□□□□ -0.82
SKA3-206ENST00000475251 TVP23BQ9NYZ1 205 aa9.94□□□□□ -0.82
SKA3-206ENST00000475251 H2AFY2Q9P0M6 372 aaPredicted RBP9.94□□□□□ -0.82
SKA3-206ENST00000475251 ZNF729A6NN14 1252 aaPredicted RBP9.93□□□□□ -0.82
SKA3-206ENST00000475251 SIRPB1O00241 398 aa9.93□□□□□ -0.82
SKA3-206ENST00000475251 IGHG2P01859 326 aa9.93□□□□□ -0.82
SKA3-206ENST00000475251 KRT8P05787 483 aa9.93□□□□□ -0.82
SKA3-206ENST00000475251 CSN2P05814 226 aa9.93□□□□□ -0.82
SKA3-206ENST00000475251 DUSP1P28562 367 aa9.93□□□□□ -0.82
SKA3-206ENST00000475251 TRIM25Q14258 630 aaKnown RBP9.93□□□□□ -0.82
SKA3-206ENST00000475251 CXorf66Q5JRM2 361 aaPredicted RBP9.93□□□□□ -0.82
SKA3-206ENST00000475251 BAIAP2L2Q6UXY1 529 aa9.93□□□□□ -0.82
SKA3-206ENST00000475251 SLC35F2Q8IXU6 374 aa9.93□□□□□ -0.82
SKA3-206ENST00000475251 CHST4Q8NCG5 386 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms