RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 ZNF81P51508 661 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 MECP2P51608 486 aaKnown RBP5.58□□□□□ -1.52
ATG4A-207ENST00000474825 MPPED2Q15777 294 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 TRIM16LQ309B1 348 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 ZNF672Q499Z4 452 aaPredicted RBP5.58□□□□□ -1.52
ATG4A-207ENST00000474825 SPIN3Q5JUX0 258 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 FAM209AQ5JX71 171 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 VAX1Q5SQQ9 334 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 ZNF57Q68EA5 555 aaPredicted RBP5.58□□□□□ -1.52
ATG4A-207ENST00000474825 ZNF880Q6PDB4 577 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 CLEC18BQ6UXF7 455 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 CCBE1Q6UXH8 406 aaPredicted RBP5.58□□□□□ -1.52
ATG4A-207ENST00000474825 HOGA1Q86XE5 327 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 FAM58AQ8N1B3 248 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 CLEC18CQ8NCF0 446 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 CHST4Q8NCG5 386 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 FAM222BQ8WU58 562 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 CHAC2Q8WUX2 184 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 SNAPC3Q92966 411 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 EMG1Q92979 244 aaKnown RBP5.58□□□□□ -1.52
ATG4A-207ENST00000474825 FBXW5Q969U6 566 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 ELMOD3Q96FG2 381 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 NEDD4LQ96PU5 975 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 SYT3Q9BQG1 590 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 CHST6Q9GZX3 395 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 ZMAT3Q9HA38 289 aaKnown RBP5.58□□□□□ -1.52
ATG4A-207ENST00000474825 ELL3Q9HB65 397 aaPredicted RBP5.58□□□□□ -1.52
ATG4A-207ENST00000474825 FAIMQ9NVQ4 179 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 SLC2A8Q9NY64 477 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 ZNF581Q9P0T4 197 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 COPZ2Q9P299 210 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 FBXO9Q9UK97 447 aaPredicted RBP5.58□□□□□ -1.52
ATG4A-207ENST00000474825 EDARQ9UNE0 448 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 RNF115Q9Y4L5 304 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 ATP23Q9Y6H3 246 aa5.58□□□□□ -1.52
ATG4A-207ENST00000474825 COL12A1Q99715 3063 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 PLCE1Q9P212 2302 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 TRAV24A0A0B4J272 114 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 CENPXA8MT69 81 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 CEACAM18A8MTB9 384 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 FSTL3O95633 263 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 PLATP00750 562 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 CD3DP04234 171 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 GRPP07492 148 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 AKAIN1P0CW23 69 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 PRKACAP17612 351 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 GABRR1P24046 479 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 FAUP35544 74 aaKnown RBP5.57□□□□□ -1.52
ATG4A-207ENST00000474825 INPP1P49441 399 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 TAS2R19P59542 299 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 GNG2P59768 71 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 BTG1P62324 171 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 TESK1Q15569 626 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 PCGF3Q3KNV8 242 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 ACTBL2Q562R1 376 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 SPRNQ5BIV9 151 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 PRAMEF6Q5VXH4 476 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 ALKBH2Q6NS38 261 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 STEAP1BQ6NZ63 245 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 VHLLQ6RSH7 139 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 ACP7Q6ZNF0 438 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 C6orf201Q7Z4U5 140 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 TRAPPC6BQ86SZ2 158 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 GCSAMQ8N6F7 178 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 OR2Z1Q8NG97 314 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 NUDCD2Q8WVJ2 157 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 CYYR1Q96J86 154 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 ZNF488Q96MN9 340 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 OR2V2Q96R30 315 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 DHRS9Q9BPW9 319 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 SULT4A1Q9BR01 284 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 FAAP24Q9BTP7 215 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 MS4A5Q9H3V2 200 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 RIMS4Q9H426 269 aaPredicted RBP5.57□□□□□ -1.52
ATG4A-207ENST00000474825 FN3KRPQ9HA64 309 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 GCM1Q9NP62 436 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 PLEKHJ1Q9NW61 149 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 POU2F3Q9UKI9 436 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 KLF2Q9Y5W3 355 aaPredicted RBP5.57□□□□□ -1.52
ATG4A-207ENST00000474825 NUBP2Q9Y5Y2 271 aa5.57□□□□□ -1.52
ATG4A-207ENST00000474825 UBR5O95071 2799 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-207ENST00000474825 FAM240BA0A1B0GVZ2 78 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 ZNF736B4DX44 427 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-207ENST00000474825 M0R233 179 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 SLC33A1O00400 549 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-207ENST00000474825 OR7C1O76099 320 aaPredicted RBP5.56□□□□□ -1.52
ATG4A-207ENST00000474825 NDUFB6O95139 128 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 PLAUP00749 431 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 TCRBP04435 133 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 CSN2P05814 226 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 TNFSF4P23510 183 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 KCNJ3P48549 501 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 SNTB1Q13884 538 aaKnown RBP5.56□□□□□ -1.52
ATG4A-207ENST00000474825 MEF2DQ14814 521 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 ZMYND11Q15326 602 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 NKPD1Q17RQ9 610 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 TEX36Q5VZQ5 186 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 C11orf71Q6IPW1 123 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 Q6ZPA2 131 aa5.56□□□□□ -1.52
ATG4A-207ENST00000474825 ZNF826PQ6ZT77 177 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms