RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 HTR3BO95264 441 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 OR2H2O95918 312 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 HAND1O96004 215 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 TGFAP01135 160 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 MSMBP08118 114 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 SLC2A2P11168 524 aaPredicted RBP5.77□□□□□ -1.49
LIMD1-204ENST00000474665 PRKACAP17612 351 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 CPT2P23786 658 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 LMO1P25800 156 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 OR3A1P47881 315 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 MTNR1BP49286 362 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 GZMKP49863 264 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 SNU13P55769 128 aaKnown RBP5.77□□□□□ -1.49
LIMD1-204ENST00000474665 RBM11P57052 281 aaKnown RBP5.77□□□□□ -1.49
LIMD1-204ENST00000474665 NCS1P62166 190 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 LSM3P62310 102 aaKnown RBP5.77□□□□□ -1.49
LIMD1-204ENST00000474665 COL10A1Q03692 680 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 IKZF1Q13422 519 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 P2RY14Q15391 338 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 NHLRC3Q5JS37 347 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 GLT8D1Q68CQ7 371 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 CYB5R2Q6BCY4 276 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 GDPGP1Q6ZNW5 385 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 TCF23Q7RTU1 214 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 ANKRD13BQ86YJ7 626 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 Q8IYB0 196 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.77□□□□□ -1.49
LIMD1-204ENST00000474665 LINC01356Q8N9X3 169 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 OR4S1Q8NGB4 309 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 RAB39BQ96DA2 213 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 SSBP3Q9BWW4 388 aaPredicted RBP5.77□□□□□ -1.49
LIMD1-204ENST00000474665 FAM192AQ9GZU8 254 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 DNTTIP1Q9H147 329 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 BANF2Q9H503 90 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 VCX3AQ9NNX9 186 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 OPN4Q9UHM6 478 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 PCDHB10Q9UN67 800 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 SSR3Q9UNL2 185 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 ING4Q9UNL4 249 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 GSTK1Q9Y2Q3 226 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 V9GY05 133 aa5.77□□□□□ -1.49
LIMD1-204ENST00000474665 PPIAL4CA0A0B4J2A2 164 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 KIR2DS1A0A191URI9 304 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 FOXI3A8MTJ6 420 aaPredicted RBP5.76□□□□□ -1.49
LIMD1-204ENST00000474665 SLC33A1O00400 549 aaPredicted RBP5.76□□□□□ -1.49
LIMD1-204ENST00000474665 GEMIN2O14893 280 aaKnown RBP5.76□□□□□ -1.49
LIMD1-204ENST00000474665 GABARAPO95166 117 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 BPNT1O95861 308 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 CYB5AP00167 134 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 TK1P04183 234 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 MGMTP16455 207 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 SERPINA2P20848 420 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 HTR2CP28335 458 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 RPS19P39019 145 aaKnown RBP5.76□□□□□ -1.49
LIMD1-204ENST00000474665 RPL5P46777 297 aaKnown RBP5.76□□□□□ -1.49
LIMD1-204ENST00000474665 GABRA2P47869 451 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 EFNB2P52799 333 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 DVL1P1P54792 670 aaPredicted RBP5.76□□□□□ -1.49
LIMD1-204ENST00000474665 VBP1P61758 197 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 IL13RA1P78552 427 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 PAX8Q06710 450 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 IL13RA2Q14627 380 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 RSU1Q15404 277 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 KCNJ8Q15842 424 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 TAF9Q16594 264 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 C2orf76Q3KRA6 126 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 ESCO2Q56NI9 601 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 SPIN3Q5JUX0 258 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 HES5Q5TA89 166 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 GPR107Q5VW38 600 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 AWAT2Q6E213 333 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 BTN2A1Q7KYR7 527 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 NLRC3Q7RTR2 1065 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 SLC36A1Q7Z2H8 476 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 ZNF561Q8N587 486 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 C11orf42Q8N5U0 333 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 LY6G5BQ8NDX9 201 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 OR51D1Q8NGF3 324 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 OR8B3Q8NGG8 313 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 OR6M1Q8NGM8 313 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 FAM46BQ96A09 425 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 TMEM186Q96B77 213 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 FAM3DQ96BQ1 224 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 FOXRED1Q96CU9 486 aaPredicted RBP5.76□□□□□ -1.49
LIMD1-204ENST00000474665 CPNE2Q96FN4 548 aaPredicted RBP5.76□□□□□ -1.49
LIMD1-204ENST00000474665 COQ2Q96H96 371 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 MED30Q96HR3 178 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 Q96M66 194 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 KCTD7Q96MP8 289 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 OR8B2Q96RD0 313 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 NICN1Q9BSH3 213 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 DCTN5Q9BTE1 182 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 METTL9Q9H1A3 318 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 IFT22Q9H7X7 185 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 RHOFQ9HBH0 211 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 C19orf12Q9NSK7 152 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 HIF1ANQ9NWT6 349 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 SLC25A10Q9UBX3 287 aaPredicted RBP5.76□□□□□ -1.49
LIMD1-204ENST00000474665 FBLN5Q9UBX5 448 aa5.76□□□□□ -1.49
LIMD1-204ENST00000474665 CLN8Q9UBY8 286 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms