RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 AK3Q9UIJ7 227 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 VAX2Q9UIW0 290 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 SLC7A11Q9UPY5 501 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 CLDN16Q9Y5I7 305 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 PUS1Q9Y606 427 aaKnown RBP eCLIP7.03□□□□□ -1.28
CCDC93-208ENST00000474546 CENPEQ02224 2701 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 CELSR1Q9NYQ6 3014 aa7.03□□□□□ -1.28
CCDC93-208ENST00000474546 CPAMD8Q8IZJ3 1885 aa7.02□□□□□ -1.28
CCDC93-208ENST00000474546 ADGRG4Q8IZF6 3080 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 A0A087WZY1 265 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 A0A087X0M5 115 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 CCDC187A0A096LP49 1063 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 IGLV3-32A0A0A0MS00 114 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 A0A1B0GX30 115 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 A0A1W2PPE2 198 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 LNP1A1A4G5 178 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 POM121BA6NF01 834 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 LIPT2A6NK58 231 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 ZNF726A6NNF4 738 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 ZNF850A8MQ14 1090 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 MS4A18H0YCH9 400 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 LINC01387J3KSC0 135 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 TERTO14746 1132 aaKnown RBP7.02□□□□□ -1.29
CCDC93-208ENST00000474546 MSTNO14793 375 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 SOCS1O15524 211 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 EML2O95834 649 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 IGLV3-1P01715 115 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 HPNP05981 417 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 WNT2P09544 360 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 PVRP15151 417 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 ZNF43P17038 809 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 DRD1P21728 446 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 RPS27P42677 84 aaKnown RBP7.02□□□□□ -1.29
CCDC93-208ENST00000474546 NKX2-1P43699 371 aaPredicted RBP7.02□□□□□ -1.29
CCDC93-208ENST00000474546 CXCL12P48061 93 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 TMEM50BP56557 158 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 FAM3BP58499 235 aaPredicted RBP7.02□□□□□ -1.29
CCDC93-208ENST00000474546 RPL23AP62750 156 aaKnown RBP7.02□□□□□ -1.29
CCDC93-208ENST00000474546 RPL19P84098 196 aaKnown RBP7.02□□□□□ -1.29
CCDC93-208ENST00000474546 JOSD1Q15040 202 aaPredicted RBP7.02□□□□□ -1.29
CCDC93-208ENST00000474546 ELOBQ15370 118 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 ZNF124Q15973 351 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 NNATQ16517 81 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 IQCJQ1A5X6 159 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 MS4A18Q3C1V0 323 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 SLC22A6Q4U2R8 563 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 C2orf27AQ580R0 203 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 PYY3Q5JQD4 70 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 C1QL3Q5VWW1 255 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 OR2A2Q6IF42 318 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 MARCH3Q86UD3 253 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 FBXL14Q8N1E6 418 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 HIST3H2BBQ8N257 126 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 C12orf76Q8N812 135 aaPredicted RBP7.02□□□□□ -1.29
CCDC93-208ENST00000474546 ZNF441Q8N8Z8 693 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 ZNF383Q8NA42 475 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 MR1Q95460 341 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 TSACCQ96A04 125 aaPredicted RBP7.02□□□□□ -1.29
CCDC93-208ENST00000474546 MOB3AQ96BX8 217 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 CMBLQ96DG6 245 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 OXGR1Q96P68 337 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 IP6K3Q96PC2 410 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 OR5B12Q96R08 314 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 GAL3ST4Q96RP7 486 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 RAB40CQ96S21 281 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 AGMATQ9BSE5 352 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 RSRP1Q9BUV0 290 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 PTGES2Q9H7Z7 377 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 PNO1Q9NRX1 252 aaKnown RBP7.02□□□□□ -1.29
CCDC93-208ENST00000474546 LANCL2Q9NS86 450 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 DCAF16Q9NXF7 216 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 CISD1Q9NZ45 108 aaKnown RBP7.02□□□□□ -1.29
CCDC93-208ENST00000474546 FBXO7Q9Y3I1 522 aa7.02□□□□□ -1.29
CCDC93-208ENST00000474546 PTPRBP23467 1997 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 EML5Q05BV3 1969 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 SPTY2D1-AS1A0A0U1RR47 76 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 KIR2DS1A0A191URI9 304 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 WIPF3A6NGB9 483 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 C9JQL5 133 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 TGFBR3LH3BV60 316 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 HRKO00198 91 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 GEMIN2O14893 280 aaKnown RBP7.01□□□□□ -1.29
CCDC93-208ENST00000474546 DNPH1O43598 174 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 HIST1H2BKO60814 126 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 SCGB1D2O95969 90 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 MBP02144 154 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 HIST1H2BJP06899 126 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 SRP19P09132 144 aaKnown RBP7.01□□□□□ -1.29
CCDC93-208ENST00000474546 SERPINA2P20848 420 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 MSR1P21757 451 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 VDAC1P21796 283 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 FBLP22087 321 aaKnown RBP7.01□□□□□ -1.29
CCDC93-208ENST00000474546 HIST1H2BOP23527 126 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 HIST1H2BBP33778 126 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 KIR2DS4P43632 304 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 OR3A4PP47883 348 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 ARL4DP49703 201 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 BIDP55957 195 aa7.01□□□□□ -1.29
CCDC93-208ENST00000474546 ZNF121P58317 390 aaPredicted RBP7.01□□□□□ -1.29
CCDC93-208ENST00000474546 HIST1H2BDP58876 126 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms