RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 C7orf34Q96L11 122 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 OR2V2Q96R30 315 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 ABHD1Q96SE0 405 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 MED20Q9H944 212 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 IDI2-AS1Q9NZ38 188 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 OR1A1Q9P1Q5 309 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 DKK4Q9UBT3 224 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 RBMX2Q9Y388 322 aaKnown RBP4.04□□□□□ -1.76
CCNL1-215ENST00000474539 MICAL3Q7RTP6 2002 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 IGKV3D-11A0A0A0MRZ8 115 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 ZNF716A6NP11 495 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 ARG1P05089 322 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 HOXB5P09067 269 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 TMEM11P17152 192 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 ALOX5APP20292 161 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 CD40P25942 277 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 HOXD11P31277 338 aaPredicted RBP4.04□□□□□ -1.76
CCNL1-215ENST00000474539 PTGER1P34995 402 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 MAS1LP35410 378 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 AKR1C3P42330 323 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 RAG2P55895 527 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 FLI1Q01543 452 aaPredicted RBP4.04□□□□□ -1.76
CCNL1-215ENST00000474539 NAAAQ02083 359 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 ZNF770Q6IQ21 691 aaPredicted RBP4.04□□□□□ -1.76
CCNL1-215ENST00000474539 SLC25A47Q6Q0C1 308 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 PHC2Q8IXK0 858 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 BCL2L2Q92843 193 aaPredicted RBP4.04□□□□□ -1.76
CCNL1-215ENST00000474539 SLC25A46Q96AG3 418 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 EEF1AKMT3Q96AZ1 226 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 SDSLQ96GA7 329 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 C2orf50Q96LR7 162 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 NRIP2Q9BQI9 281 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 CHODLQ9H9P2 273 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 MMP26Q9NRE1 261 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 IL17BQ9UHF5 180 aa4.04□□□□□ -1.76
CCNL1-215ENST00000474539 YTHDF2Q9Y5A9 579 aaKnown RBP4.04□□□□□ -1.76
CCNL1-215ENST00000474539 PPIAL4CA0A0B4J2A2 164 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 B4DSR2 109 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 HPRT1P00492 218 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 MT-ND4LP03901 98 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 OR5G3P0C626 314 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 PPIAL4GP0DN37 164 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 MMP9P14780 707 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 IGFBP6P24592 240 aaPredicted RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 CEACAM6P40199 344 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 LIMS1P48059 325 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 WNT3P56703 355 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 RAB4BP61018 213 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 RHOBP62745 196 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 TAF9Q16594 264 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 Q3ZCU0 254 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 DBX2Q6ZNG2 339 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 APH1BQ8WW43 257 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 MAFIPQ8WZ33 124 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 HRH4Q9H3N8 390 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 SLC25A37Q9NYZ2 338 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 PSENENQ9NZ42 101 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 AUP1Q9Y679 476 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 hCG_38984A0A1B0GV85 526 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 RPL36A-HNRNPH2H7BZ11 118 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 HSPB6O14558 160 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 CST4P01036 141 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 IGKV3-11P04433 115 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 IL5P05113 134 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 GIPP09681 153 aaPredicted RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 CT62P0C5K7 136 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 SLC25A4P12235 298 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 FSTP19883 344 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 PMELP40967 661 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 CSRP3P50461 194 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 ATXN7L3Q14CW9 347 aaPredicted RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 TSPO2Q5TGU0 170 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 UBE3DQ7Z6J8 389 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 SLC51BQ86UW2 128 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 SYT8Q8NBV8 401 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 OR4D10Q8NGI6 311 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 CTHRC1Q96CG8 243 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 FOXN4Q96NZ1 517 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 TXNDC17Q9BRA2 123 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 SSBP3Q9BWW4 388 aaPredicted RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 COL25A1Q9BXS0 654 aaPredicted RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 NMES1Q9C002 83 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 ZNF331Q9NQX6 463 aaPredicted RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 LSM2Q9Y333 95 aaKnown RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 ADAMTSL1Q8N6G6 1762 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 TUBGCP6Q96RT7 1819 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 OR2T8A6NH00 312 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 BMPR1BO00238 502 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 SHC1P29353 583 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 PPOXP50336 477 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 C2orf76Q3KRA6 126 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 LRRC37A5PQ49AS3 106 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 TMEM128Q5BJH2 165 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 CST9LP1Q5W188 147 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 HIST2H3AQ71DI3 136 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 KCNRGQ8N5I3 272 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 RTN4IP1Q8WWV3 396 aaPredicted RBP4.03□□□□□ -1.76
CCNL1-215ENST00000474539 LHX4Q969G2 390 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 METTL26Q96S19 204 aa4.03□□□□□ -1.76
CCNL1-215ENST00000474539 PDCD1LG2Q9BQ51 273 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms