RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 SDHAF2Q9NX18 166 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 ZMAT5Q9UDW3 170 aaKnown RBP1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 KPTNQ9Y664 436 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 V9GYY9 64 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 TTC41PQ6P2S7 1318 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 NRCAMQ92823 1304 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 C2orf16Q68DN1 1984 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 NOS1P29475 1434 aa1.32□□□□□ -2.2
ECHDC1-213ENST00000474240 PLXNB1O43157 2135 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 SVILO95425 2214 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 TRAV8-7A0A075B6U6 113 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 A0A0J9YYE9 177 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 GOLGA6L7A0A1B0GV03 622 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 SDHAF1A6NFY7 115 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 KLRC4-KLRK1H3BQV0 150 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 TRBC1P01850 177 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 TRGV3P03979 118 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 IGKV1-16P04430 117 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 GYPCP04921 128 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 CECR9P0C854 216 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 PSMB9P28065 219 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 STX4Q12846 297 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 KRTAP21-3Q3LHN1 58 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 DPPA2Q7Z7J5 298 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 RBM45Q8IUH3 476 aaKnown RBP1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 C10orf107Q8IVU9 208 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 OR51L1Q8NGJ5 315 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 CDKL2Q92772 493 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 FXYD5Q96DB9 178 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 C20orf166-AS1Q96NR2 134 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 CIB1Q99828 191 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 GAL3ST2Q9H3Q3 398 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 MFSD1Q9H3U5 465 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 ASB7Q9H672 318 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 PLEKHA1Q9HB21 404 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 RPRD1BQ9NQG5 326 aaKnown RBP1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 PRR14LQ5THK1 2151 aa1.31□□□□□ -2.2
ECHDC1-213ENST00000474240 ZNF407Q9C0G0 2248 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 A0A1B0GU33 70 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 A0A1W2PPV4 95 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 A0A1W2PRG6 482 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 GOLGA8IPA6NC78 632 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 C3orf84H3BNL1 204 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 PRMT5O14744 637 aaPredicted RBP1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 STAG3L2P0CL84 134 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 GIMD1P0DJR0 217 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 CSRP1P21291 193 aaKnown RBP1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 HTR2CP28335 458 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 DHRS2Q13268 280 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 TAL2Q16559 108 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 TMEM241Q24JQ0 296 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 NXNL2Q5VZ03 156 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 RESP18Q5W5W9 173 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 PRNTQ86SH4 94 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 CNPY4Q8N129 248 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 LINC00337Q8N6G1 96 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 FER1L6-AS1Q8NA97 138 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 BLNKQ8WV28 456 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 KIAA1143Q96AT1 154 aaPredicted RBP1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 C20orf144Q9BQM9 153 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 BEX2Q9BXY8 128 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 TM6SF2Q9BZW4 377 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 SLC25A31Q9H0C2 315 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 ZNF443Q9Y2A4 671 aaPredicted RBP1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 ZNF706Q9Y5V0 76 aaPredicted RBP1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 OTOGLQ3ZCN5 2332 aa1.3□□□□□ -2.2
ECHDC1-213ENST00000474240 TRBV24-1A0A075B6N3 115 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 A0A1W2PNM2 257 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 PGPA6NDG6 321 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 A6NED7 52 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 H0YC42 278 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 UBDO15205 165 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 GYG2O15488 501 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 EEF1E1O43324 174 aaKnown RBP1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 PDYNP01213 254 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 IGKV1D-33P01593 117 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 IGKV1-33P01594 117 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 OPN1SWP03999 348 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 IFI30P13284 250 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 SRMP19623 302 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 CPN2P22792 545 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 P2RY2P41231 377 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 RANBP1P43487 201 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 DNASE1L1P49184 302 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 Q499Y3 187 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 ACTBL2Q562R1 376 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 EPGNQ6UW88 154 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 GALNT10Q86SR1 603 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 ZFP82Q8N141 532 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 OR8G5Q8NG78 346 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 TNFRSF14Q92956 283 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 RAD51AP1Q96B01 352 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 OLFM3Q96PB7 478 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 OR8B2Q96RD0 313 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 PITX2Q99697 317 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 UTP23Q9BRU9 249 aaKnown RBP1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 NXF2Q9GZY0 626 aaKnown RBP1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 ANKHQ9HCJ1 492 aa1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 DDX18Q9NVP1 670 aaKnown RBP1.29□□□□□ -2.2
ECHDC1-213ENST00000474240 RABL2AQ9UBK7 228 aaPredicted RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms