RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 DOCK11Q5JSL3 2073 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 TRAV8-7A0A075B6U6 113 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 M0R1W7 72 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 SIRPB1O00241 398 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 ARL6IP5O75915 188 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 RGS9O75916 674 aaPredicted RBP11.34□□□□□ -0.59
USF1-205ENST00000473969 CDRT1O95170 752 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 FSHBP01225 129 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 EMX1Q04741 257 aaPredicted RBP11.34□□□□□ -0.59
USF1-205ENST00000473969 EDDM3AQ14507 147 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 KLF17Q5JT82 389 aaPredicted RBP11.34□□□□□ -0.59
USF1-205ENST00000473969 GLT8D1Q68CQ7 371 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 ELP2Q6IA86 826 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 UNQ9370/PRO34162Q6UXP9 181 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 C1orf122Q6ZSJ8 110 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 VMO1Q7Z5L0 202 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 CHST4Q8NCG5 386 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 C22orf15Q8WYQ4 148 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 PHYHIPQ92561 330 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 FCGR1BQ92637 280 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 LHX4Q969G2 390 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 FOXRED1Q96CU9 486 aaPredicted RBP11.34□□□□□ -0.59
USF1-205ENST00000473969 IL36RNQ9UBH0 155 aa11.34□□□□□ -0.59
USF1-205ENST00000473969 JMJD1CQ15652 2540 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 MGST3O14880 152 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 PIN1P1O15428 100 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 ZNF737O75373 536 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 OR2H2O95918 312 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 IGHV4-38-2P0DP08 117 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 SRMP19623 302 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 SERPINA2P20848 420 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 GABRA5P31644 462 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 GUCA2AQ02747 115 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 AWAT2Q6E213 333 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 CRIP3Q6Q6R5 217 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 ASCL4Q6XD76 172 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 PHC2Q8IXK0 858 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 OSR2Q8N2R0 312 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 OR10K1Q8NGX5 313 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 MUL1Q969V5 352 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 TBX15Q96SF7 602 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 SLC6A7Q99884 636 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 CHST6Q9GZX3 395 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 SIRPDQ9H106 197 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 METTL8Q9H825 291 aaKnown RBP11.33□□□□□ -0.6
USF1-205ENST00000473969 SIRT7Q9NRC8 400 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 C19orf12Q9NSK7 152 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 IL36GQ9NZH8 169 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 ZNF69Q9UC07 566 aa11.33□□□□□ -0.6
USF1-205ENST00000473969 MRPS28Q9Y2Q9 187 aaKnown RBP11.33□□□□□ -0.6
USF1-205ENST00000473969 hADV38S2A0JD32 116 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 TMEM82A0PJX8 343 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 GTF2F2P13984 249 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 MMP9P14780 707 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 PSMB9P28065 219 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 RANBP1P43487 201 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 RPS25P62851 125 aaKnown RBP11.32□□□□□ -0.6
USF1-205ENST00000473969 MEF2CQ06413 473 aaPredicted RBP11.32□□□□□ -0.6
USF1-205ENST00000473969 IL13RA2Q14627 380 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 INSL4Q14641 139 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 SLC22A6Q4U2R8 563 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 NCR3LG1Q68D85 454 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 TMEM200BQ69YZ2 307 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 ZNF773Q6PK81 442 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 GLIPR1L1Q6UWM5 242 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 C17orf107Q6ZR85 190 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 TRAPPC6BQ86SZ2 158 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 SPARTQ8N0X7 666 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 TMEM158Q8WZ71 300 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 ZDHHC16Q969W1 377 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 NKX3-1Q99801 234 aaPredicted RBP11.32□□□□□ -0.6
USF1-205ENST00000473969 UQCC2Q9BRT2 126 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 ST3GAL6Q9Y274 331 aa11.32□□□□□ -0.6
USF1-205ENST00000473969 ANK3Q12955 4377 aaKnown RBP11.31□□□□□ -0.6
USF1-205ENST00000473969 IGHV1-69DA0A0B4J2H0 117 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 CENPVL3A0A0U1RRI6 287 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 MAGEA13PA6NCF6 341 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 PSPNO60542 156 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 IGHV1-69P01742 117 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 UCHL1P09936 223 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 LMO1P25800 156 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 ERP29P30040 261 aaKnown RBP11.31□□□□□ -0.6
USF1-205ENST00000473969 KCTD21Q4G0X4 260 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 PAN3Q58A45 887 aaKnown RBP11.31□□□□□ -0.6
USF1-205ENST00000473969 FAM27D1Q5T7N8 215 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 BRD3OSQ6XYD6 125 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 USP43Q70EL4 1123 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 LINC00596Q86U02 117 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 PDZD9Q8IXQ8 264 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 OR4S1Q8NGB4 309 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 OR51T1Q8NGJ9 327 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 PPA2Q9H2U2 334 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 HEXA-AS1Q9H8Q6 139 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 GHRLQ9UBU3 117 aa11.31□□□□□ -0.6
USF1-205ENST00000473969 A0A0G2JK05 382 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 CCRL2O00421 344 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 SC5DO75845 299 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 OR7C1O76099 320 aaPredicted RBP11.3□□□□□ -0.6
USF1-205ENST00000473969 PRTN3P24158 256 aa11.3□□□□□ -0.6
USF1-205ENST00000473969 OR3A1P47881 315 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms