RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SONP18583 2426 aaKnown RBP10.27□□□□□ -0.77
DDX56-209ENST00000473924 TRBV23-1A0A0A0MS06 115 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 PDCD5O14737 125 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 OR2H2O95918 312 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 GTF2F2P13984 249 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 EDDM3BP56851 147 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 ARF6P62330 175 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 PDCD1Q15116 288 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 GRK1Q15835 563 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 PIGYQ3MUY2 71 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 C22orf42Q6IC83 251 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 CD200R1LQ6Q8B3 271 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 C1orf229Q6ZS94 237 aaPredicted RBP10.26□□□□□ -0.77
DDX56-209ENST00000473924 CMTM4Q8IZR5 234 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 OR8H2Q8N162 312 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 OR51T1Q8NGJ9 327 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 NANPQ8TBE9 248 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 TBC1D15Q8TC07 691 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 DACT3Q96B18 629 aaPredicted RBP10.26□□□□□ -0.77
DDX56-209ENST00000473924 PCGF1Q9BSM1 259 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 CHST6Q9GZX3 395 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 PLGRKTQ9HBL7 147 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 OPN4Q9UHM6 478 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 STUB1Q9UNE7 303 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 SSR3Q9UNL2 185 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 ST3GAL6Q9Y274 331 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 AK6Q9Y3D8 172 aaKnown RBP10.26□□□□□ -0.77
DDX56-209ENST00000473924 WNK2Q9Y3S1 2297 aa10.26□□□□□ -0.77
DDX56-209ENST00000473924 A0A1W2PPH5 198 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 TMEM82A0PJX8 343 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 ZNF737O75373 536 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 CRTAPO75718 401 aaPredicted RBP10.25□□□□□ -0.77
DDX56-209ENST00000473924 TOX4O94842 621 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 FAM157CP0CG43 387 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 CD36P16671 472 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 HTR2CP28335 458 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 PSMD7P51665 324 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 RPL31P62899 125 aaKnown RBP10.25□□□□□ -0.77
DDX56-209ENST00000473924 BLMHQ13867 455 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 EDDM3AQ14507 147 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 IL13RA2Q14627 380 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 C1orf100Q5SVJ3 147 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 C17orf107Q6ZR85 190 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 LYPD6Q86Y78 171 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 CHST4Q8NCG5 386 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 LY6G5BQ8NDX9 201 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 Q8NFD4 153 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 OR4M1Q8NGD0 313 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 C8orf46Q8TAG6 207 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 DMRTB1Q96MA1 342 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 WDFY2Q96P53 400 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 C19orf12Q9NSK7 152 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 GHRLQ9UBU3 117 aa10.25□□□□□ -0.77
DDX56-209ENST00000473924 FN1P02751 2386 aaKnown RBP10.25□□□□□ -0.77
DDX56-209ENST00000473924 TRAV1-2A0A0B4J238 106 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 A0A0G2JK05 382 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 LOC100506127A0A0U1RQW1 187 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 A0A1W2PP11 408 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 SLC33A1O00400 549 aaPredicted RBP10.24□□□□□ -0.77
DDX56-209ENST00000473924 HSPB6O14558 160 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 MGST3O14880 152 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 PSPNO60542 156 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 OR7C1O76099 320 aaPredicted RBP10.24□□□□□ -0.77
DDX56-209ENST00000473924 UBBP0CG47 229 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 LMO1P25800 156 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 FGF9P31371 208 aaPredicted RBP10.24□□□□□ -0.77
DDX56-209ENST00000473924 RANBP1P43487 201 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 RBM11P57052 281 aaKnown RBP10.24□□□□□ -0.77
DDX56-209ENST00000473924 SCGB2A2Q13296 93 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 PAN3Q58A45 887 aaKnown RBP10.24□□□□□ -0.77
DDX56-209ENST00000473924 Q6P435 159 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 LINC00596Q86U02 117 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 OR4S1Q8NGB4 309 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 OR6M1Q8NGM8 313 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 FAM46BQ96A09 425 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 MRPS24Q96EL2 167 aaKnown RBP10.24□□□□□ -0.77
DDX56-209ENST00000473924 CHCHD6Q9BRQ6 235 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 CST11Q9H112 138 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 OR51E2Q9H255 320 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 PPA2Q9H2U2 334 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 BANF2Q9H503 90 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 TXNL4BQ9NX01 149 aaKnown RBP10.24□□□□□ -0.77
DDX56-209ENST00000473924 KPTNQ9Y664 436 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 V9GY05 133 aa10.24□□□□□ -0.77
DDX56-209ENST00000473924 TRAV40A0A0B4J280 105 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 FUOMA2VDF0 154 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 SLC17A2O00624 439 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 GEMIN2O14893 280 aaKnown RBP10.23□□□□□ -0.77
DDX56-209ENST00000473924 SLC22A1O15245 554 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 MGMTP16455 207 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 RAB3BP20337 219 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 GADD45AP24522 165 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 OR3A1P47881 315 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 RAB11BQ15907 218 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 TAF9Q16594 264 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 MPV17LQ2QL34 196 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 TIMM50Q3ZCQ8 353 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 NHLRC3Q5JS37 347 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 ATAD3CQ5T2N8 411 aa10.23□□□□□ -0.77
DDX56-209ENST00000473924 TMEM200BQ69YZ2 307 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms