RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 ZNF578Q96N58 590 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ERMAPQ96PL5 475 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SLC38A2Q96QD8 506 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TAAR6Q96RI8 345 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RASL10BQ96S79 203 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 INTS14Q96SY0 518 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 NMNAT3Q96T66 252 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CNN2Q99439 309 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SH3GL3Q99963 347 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 PDCD1LG2Q9BQ51 273 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SLC30A2Q9BRI3 323 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 PELOQ9BRX2 385 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TMED9Q9BVK6 235 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 HES7Q9BYE0 225 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 MROQ9BYG7 248 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SRXN1Q9BYN0 137 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 STRADBQ9C0K7 418 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SRRQ9GZT4 340 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 C6orf62Q9GZU0 229 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SYT4Q9H2B2 425 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SLC26A1Q9H2B4 701 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 OR51V1Q9H2C8 321 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 C5orf66Q9H5L9 145 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RERGLQ9H628 205 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM185BQ9H7F4 350 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 AUNIPQ9H7T9 357 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 MOB1AQ9H8S9 216 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RNF121Q9H920 327 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 WDR76Q9H967 626 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 MARCH7Q9H992 704 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 C12orf10Q9HB07 376 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CACYBPQ9HB71 228 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TMEM27Q9HBJ8 222 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 PLGRKTQ9HBL7 147 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF160Q9HCG1 818 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SH2D2AQ9NP31 389 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 PALMDQ9NP74 551 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ABCB9Q9NP78 766 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 EXOSC4Q9NPD3 245 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ISYNA1Q9NPH2 558 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RPRD1BQ9NQG5 326 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 UBQLN4Q9NRR5 601 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 FAIMQ9NVQ4 179 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 MRPL22Q9NWU5 206 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RHBDL2Q9NX52 303 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 COPS7AQ9UBW8 275 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 MRM2Q9UI43 246 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 KLHL21Q9UJP4 597 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF229Q9UJW7 825 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CFL2Q9Y281 166 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 SLC35A3Q9Y2D2 325 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 EXOSC1Q9Y3B2 195 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TMED7Q9Y3B3 224 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 MRPS18CQ9Y3D5 142 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF337Q9Y3M9 751 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RHBDD3Q9Y3P4 386 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 RPL36Q9Y3U8 105 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 IER3IP1Q9Y5U9 82 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 WIF1Q9Y5W5 379 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 MRPS18BQ9Y676 258 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 CHCHD2Q9Y6H1 151 aaPredicted RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 DYNC1H1Q14204 4646 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 TENM1Q9UKZ4 2725 aa1.12□□□□□ -2.23
CCDC39-203ENST00000473854 FLNBO75369 2602 aaKnown RBP1.12□□□□□ -2.23
CCDC39-203ENST00000473854 HIVEP1P15822 2718 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 NACAE9PAV3 2078 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 FAT2Q9NYQ8 4349 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 A0A075B6Q4 140 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TRAV8-7A0A075B6U6 113 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TRAV36DV7A0A075B6V5 113 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 IGHV3-15A0A0B4J1V0 119 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TRGV8A0A0C4DH27 118 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 A0A0G2JMP0 313 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 A0A0X1KG70 313 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 LOC107986453A0A1B0GWG9 222 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TRDV1A0A1B0GX56 115 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 IRGMA1A4Y4 181 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 FUOMA2VDF0 154 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 PRSS37A4D1T9 235 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 HTR3EA5X5Y0 456 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 C5orf63A6NC05 138 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 C5orf52A6NGY3 159 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 A6NIN4 97 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 OR4C45A6NMZ5 311 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 A8MVM7 634 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 E5RGE8 158 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 J3QLW9 94 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 M0R3G1 203 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 PLPP3O14495 311 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 SLC30A4O14863 429 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 CASKO14936 926 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ARPC3O15145 178 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TOX3O15405 576 aaPredicted RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 FLRT2O43155 660 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ST8SIA3O43173 380 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 MLNRO43193 412 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 EIF4E2O60573 245 aaKnown RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 RAD1O60671 282 aa1.11□□□□□ -2.23
CCDC39-203ENST00000473854 TRIM3O75382 744 aaPredicted RBP1.11□□□□□ -2.23
CCDC39-203ENST00000473854 ZNF254O75437 659 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms