RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 IGHV1OR15-9A0A0B4J2B8 117 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 CLDN34H7C241 214 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 LINC01565O15544 149 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 ONECUT2O95948 504 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 OPN1MWP04001 364 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 SRP19P09132 144 aaKnown RBP5.33□□□□□ -1.56
HERC4-209ENST00000473533 OPN1MW2P0DN77 364 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 OPN1MW3P0DN78 364 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 FOLR1P15328 257 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 VDAC1P21796 283 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 ATP6V0CP27449 155 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 AKR1C3P42330 323 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 NOVA1P51513 510 aaKnown RBP5.33□□□□□ -1.56
HERC4-209ENST00000473533 NDUFA6P56556 154 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 OR1D5P58170 312 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 NXPH1P58417 271 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 PKIAP61925 76 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 HLA-DRB3P79483 266 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 FAM69BQ5VUD6 431 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 ZNF600Q6ZNG1 722 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 SAXO1Q8IYX7 474 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 GPR137CQ8N3F9 429 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 IL22RA1Q8N6P7 574 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 OR5L1Q8NGL2 311 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 REEP6Q96HR9 211 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 LYZL4Q96KX0 146 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 RAB40CQ96S21 281 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 ATP5SQ99766 215 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 ZNF442Q9H7R0 627 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 ZNF319Q9P2F9 582 aa5.33□□□□□ -1.56
HERC4-209ENST00000473533 RP1L1Q8IWN7 2480 aaPredicted RBP5.33□□□□□ -1.56
HERC4-209ENST00000473533 OR6C6A6NF89 314 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 NRASP01111 189 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 PPYP01298 95 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 ARG1P05089 322 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 DSCR4P56555 118 aaPredicted RBP5.32□□□□□ -1.56
HERC4-209ENST00000473533 TAS2R30P59541 319 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 TFF2Q03403 129 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 ENDOGQ14249 297 aaKnown RBP5.32□□□□□ -1.56
HERC4-209ENST00000473533 LINC00596Q86U02 117 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 MR1Q95460 341 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 PINX1Q96BK5 328 aaKnown RBP5.32□□□□□ -1.56
HERC4-209ENST00000473533 SGK3Q96BR1 496 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 FAAP24Q9BTP7 215 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 WFDC1Q9HC57 220 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 GPR173Q9NS66 373 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 RARRES3Q9UL19 164 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 RP1P56715 2156 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 CCDC187A0A096LP49 1063 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 ZNF816-ZNF321PA0A0X1KG74 233 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 C17orf51A8MQB3 221 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 PPIHO43447 177 aaKnown RBP5.32□□□□□ -1.56
HERC4-209ENST00000473533 PIAS2O75928 621 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 ID4P47928 161 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 DLK1P80370 383 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 PHLDA2Q53GA4 152 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 C1QL2Q7Z5L3 287 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 TMEM252Q8N6L7 170 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 SLC35G3Q8N808 338 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 OR1F12Q8NHA8 337 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 HPSE2Q8WWQ2 592 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 YPEL4Q96NS1 127 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 RBM24Q9BX46 236 aaKnown RBP5.32□□□□□ -1.56
HERC4-209ENST00000473533 PLK3Q9H4B4 646 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 PLA2G2EQ9NZK7 142 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 RTTNQ86VV8 2226 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 THADAQ6YHU6 1953 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 A0A1W2PNR3 127 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 ZNF724A8MTY0 619 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 CYB5R3P00387 301 aaPredicted RBP5.32□□□□□ -1.56
HERC4-209ENST00000473533 HIST1H1BP16401 226 aaKnown RBP5.32□□□□□ -1.56
HERC4-209ENST00000473533 ACER2Q5QJU3 275 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 TMEM42Q69YG0 159 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 OR5D13Q8NGL4 314 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 OR5R1Q8NH85 324 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 CPT1CQ8TCG5 803 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 KCNE4Q8WWG9 221 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 S100PBPQ96BU1 408 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 ZNF775Q96BV0 537 aaPredicted RBP5.32□□□□□ -1.56
HERC4-209ENST00000473533 LIN37Q96GY3 246 aaPredicted RBP5.32□□□□□ -1.56
HERC4-209ENST00000473533 PSMG3Q9BT73 122 aaPredicted RBP5.32□□□□□ -1.56
HERC4-209ENST00000473533 CISD1Q9NZ45 108 aaKnown RBP5.32□□□□□ -1.56
HERC4-209ENST00000473533 DOK5Q9P104 306 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 PITPNC1Q9UKF7 332 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 ST3GAL6Q9Y274 331 aa5.32□□□□□ -1.56
HERC4-209ENST00000473533 MRPS17Q9Y2R5 130 aaKnown RBP5.32□□□□□ -1.56
HERC4-209ENST00000473533 ATG2AQ2TAZ0 1938 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 ATG2BQ96BY7 2078 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 A0A1B0GU03 582 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 A0A1W2PPE3 182 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 SMCO3A2RU48 225 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 C2orf72A6NCS6 295 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 CDRT15L2A8MXV6 281 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 RPL36A-HNRNPH2H7BZ11 118 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 MASP2O00187 686 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 TERTO14746 1132 aaKnown RBP5.31□□□□□ -1.56
HERC4-209ENST00000473533 LCATP04180 440 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 WNT2P09544 360 aa5.31□□□□□ -1.56
HERC4-209ENST00000473533 PPP1CCP36873 323 aaKnown RBP5.31□□□□□ -1.56
HERC4-209ENST00000473533 RBM11P57052 281 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms