RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 FAM90A23PA8MXZ1 464 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 AIREO43918 545 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 TMEM127O75204 238 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 TFAP2AP05549 437 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 FAM90A15PP0C7V4 464 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 FAM90A13PP0C7W8 464 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 FAM90A14PP0C7W9 464 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 FAM90A24PP0C7X0 464 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 DUX4L2P0CJ85 424 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 DUX4L3P0CJ86 424 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 DUX4L4P0CJ87 422 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 DUX4L5P0CJ88 424 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 DUX4L6P0CJ89 424 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 DUX4L7P0CJ90 424 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 SERPINA2P20848 420 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 RBM11P57052 281 aaKnown RBP16.56■□□□□ 0.24
SF1-213ENST00000472725 DUX4L9Q6RFH8 374 aaPredicted RBP16.56■□□□□ 0.24
SF1-213ENST00000472725 BTN2A1Q7KYR7 527 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 OR8H2Q8N162 312 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 OR10K1Q8NGX5 313 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 KCNG3Q8TAE7 436 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 NKX3-1Q99801 234 aaPredicted RBP16.56■□□□□ 0.24
SF1-213ENST00000472725 DCTN5Q9BTE1 182 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 IL36RNQ9UBH0 155 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 DUX4Q9UBX2 424 aa16.56■□□□□ 0.24
SF1-213ENST00000472725 RPUSD1Q9UJJ7 312 aaKnown RBP16.56■□□□□ 0.24
SF1-213ENST00000472725 LOC100506127A0A0U1RQW1 187 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 SHISA3A0PJX4 238 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 DEGS1O15121 323 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 FCN3O75636 299 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 OR2H2O95918 312 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 PPIAL4GP0DN37 164 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 NDUFB7P17568 137 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 CEBPDP49716 269 aaPredicted RBP16.55■□□□□ 0.24
SF1-213ENST00000472725 RAB11BQ15907 218 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 Q6P435 159 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 OR2W3Q7Z3T1 314 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 ASCC1Q8N9N2 400 aaKnown RBP16.55■□□□□ 0.24
SF1-213ENST00000472725 LY6G5BQ8NDX9 201 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 SLC25A28Q96A46 364 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 NUDT16L1Q9BRJ7 211 aaKnown RBP16.55■□□□□ 0.24
SF1-213ENST00000472725 FUNDC2Q9BWH2 189 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 SPACA1Q9HBV2 294 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 FBLN5Q9UBX5 448 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 LPAR3Q9UBY5 353 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 STEAP1Q9UHE8 339 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 METRNQ9UJH8 293 aa16.55■□□□□ 0.24
SF1-213ENST00000472725 FUOMA2VDF0 154 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 IFITM5A6NNB3 132 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 C22orf46C9J442 243 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 AIPO00170 330 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 CSN2P05814 226 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 SELLP14151 372 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 ZNF44P15621 663 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 ARSBP15848 533 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 MGMTP16455 207 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 DUSP1P28562 367 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 KCNJ3P48549 501 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 PAX8Q06710 450 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 C17orf107Q6ZR85 190 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 CENPOQ9BU64 300 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 MRI1Q9BV20 369 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 SHARPINQ9H0F6 387 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 MMP26Q9NRE1 261 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 ZANQ9Y493 2812 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 ARHGAP32A7KAX9 2087 aa16.54■□□□□ 0.24
SF1-213ENST00000472725 A0A0G2JK05 382 aa16.53■□□□□ 0.24
SF1-213ENST00000472725 NOTOA8MTQ0 251 aa16.53■□□□□ 0.24
SF1-213ENST00000472725 MGST3O14880 152 aa16.53■□□□□ 0.24
SF1-213ENST00000472725 CRTAPO75718 401 aaPredicted RBP16.53■□□□□ 0.24
SF1-213ENST00000472725 TFF1P04155 84 aa16.53■□□□□ 0.24
SF1-213ENST00000472725 VSIG8P0DPA2 414 aa16.53■□□□□ 0.24
SF1-213ENST00000472725 CALCBP10092 127 aa16.53■□□□□ 0.24
SF1-213ENST00000472725 HNF1AP20823 631 aa16.53■□□□□ 0.24
SF1-213ENST00000472725 GABRR1P24046 479 aa16.53■□□□□ 0.24
SF1-213ENST00000472725 ERP29P30040 261 aaKnown RBP16.53■□□□□ 0.24
SF1-213ENST00000472725 RPL5P46777 297 aaKnown RBP16.53■□□□□ 0.24
SF1-213ENST00000472725 SNU13P55769 128 aaKnown RBP16.53■□□□□ 0.24
SF1-213ENST00000472725 FAM189A2Q15884 450 aa16.53■□□□□ 0.24
SF1-213ENST00000472725 GDPD3Q7L5L3 318 aa16.53■□□□□ 0.24
SF1-213ENST00000472725 GPR141Q7Z602 305 aa16.53■□□□□ 0.24
SF1-213ENST00000472725 ANKRD13BQ86YJ7 626 aa16.53■□□□□ 0.24
SF1-213ENST00000472725 SCOCQ9UIL1 159 aa16.53■□□□□ 0.24
SF1-213ENST00000472725 HIVEP2P31629 2446 aa16.53■□□□□ 0.24
SF1-213ENST00000472725 WNK2Q9Y3S1 2297 aa16.52■□□□□ 0.24
SF1-213ENST00000472725 A0A1W2PPH5 198 aa16.52■□□□□ 0.24
SF1-213ENST00000472725 TMEM82A0PJX8 343 aa16.52■□□□□ 0.24
SF1-213ENST00000472725 TMEM14DPA8MWL7 114 aa16.52■□□□□ 0.24
SF1-213ENST00000472725 SLC33A1O00400 549 aaPredicted RBP16.52■□□□□ 0.24
SF1-213ENST00000472725 PSPNO60542 156 aa16.52■□□□□ 0.24
SF1-213ENST00000472725 SDC2P34741 201 aa16.52■□□□□ 0.24
SF1-213ENST00000472725 QRFPP83859 136 aa16.52■□□□□ 0.24
SF1-213ENST00000472725 PAX5Q02548 391 aa16.52■□□□□ 0.24
SF1-213ENST00000472725 MEF2CQ06413 473 aaPredicted RBP16.52■□□□□ 0.24
SF1-213ENST00000472725 CR1LQ2VPA4 569 aa16.52■□□□□ 0.24
SF1-213ENST00000472725 PIGYQ3MUY2 71 aa16.52■□□□□ 0.24
SF1-213ENST00000472725 FAHD2BQ6P2I3 314 aaPredicted RBP16.52■□□□□ 0.24
SF1-213ENST00000472725 CROCCP3Q8IVE0 287 aa16.52■□□□□ 0.24
SF1-213ENST00000472725 KIR3DL3Q8N743 410 aa16.52■□□□□ 0.24
SF1-213ENST00000472725 H1FXQ92522 213 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms